RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 C22orf46C9J442 243 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 F5H423 210 aaPredicted RBP5.44□□□□□ -1.54
VPS41-211ENST00000466017 FFAR3O14843 346 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 PRPF4O43172 522 aaKnown RBP eCLIP5.44□□□□□ -1.54
VPS41-211ENST00000466017 TSPAN6O43657 245 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 NPHS1O60500 1241 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 TRIM13O60858 407 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 RNASEH1O60930 286 aaKnown RBP5.44□□□□□ -1.54
VPS41-211ENST00000466017 VAPBO95292 243 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 PIGNO95427 931 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 AHSGP02765 367 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 UGT2B4P06133 528 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 CTSLP07711 333 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 CHRNB1P11230 501 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 COL6A2P12110 1019 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 IL9P15248 144 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 TEAD1P28347 426 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 GABRB3P28472 473 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 FOXN2P32314 431 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 SLC26A3P40879 764 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 MAGEA12P43365 314 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 SPINT3P49223 89 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 STC1P52823 247 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 LIMK2P53671 638 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 PRAMEP78395 509 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 CRADDP78560 199 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 SATB1Q01826 763 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 PEX6Q13608 980 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 ARHGEF7Q14155 803 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 GALNT3Q14435 633 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 MLF2Q15773 248 aaPredicted RBP5.44□□□□□ -1.54
VPS41-211ENST00000466017 HSP90AA5PQ58FG0 334 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 TTMPQ5BVD1 217 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 AARS2Q5JTZ9 985 aaKnown RBP5.44□□□□□ -1.54
VPS41-211ENST00000466017 EGFLAMQ63HQ2 1017 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 MRNIPQ6NTE8 343 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 NEK5Q6P3R8 708 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 AFTPHQ6ULP2 937 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 CES3Q6UWW8 571 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 SERPINA13PQ6UXR4 307 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 ZNF852Q6ZMS4 543 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 USP30Q70CQ3 517 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 ERN2Q76MJ5 926 aaKnown RBP5.44□□□□□ -1.54
VPS41-211ENST00000466017 CEP68Q76N32 757 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 DPPA4Q7L190 304 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 KDELC2Q7Z4H8 507 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 SNX20Q7Z614 316 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 TECPR1Q7Z6L1 1165 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 SDCCAG8Q86SQ7 713 aaPredicted RBP5.44□□□□□ -1.54
VPS41-211ENST00000466017 TTC7BQ86TV6 843 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 ZC3HC1Q86WB0 502 aaKnown RBP5.44□□□□□ -1.54
VPS41-211ENST00000466017 UBALD2Q8IYN6 164 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 CHPFQ8IZ52 775 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 STK40Q8N2I9 435 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 RYBPQ8N488 228 aaPredicted RBP5.44□□□□□ -1.54
VPS41-211ENST00000466017 PPM1NQ8N819 430 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 SYT8Q8NBV8 401 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 OR4K2Q8NGD2 314 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 UHMK1Q8TAS1 419 aaKnown RBP5.44□□□□□ -1.54
VPS41-211ENST00000466017 PIP4K2CQ8TBX8 421 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 BLOC1S5Q8TDH9 187 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 HEXDCQ8WVB3 486 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 DIO2Q92813 273 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 HDAC10Q969S8 669 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 CENPTQ96BT3 561 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 EID2BQ96D98 161 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 C20orf173Q96LM9 149 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 TTC1Q99614 292 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 GPR22Q99680 433 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 RBBP8Q99708 897 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 GPR63Q9BZJ6 419 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 RHOJQ9H4E5 214 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 CNOT10Q9H9A5 744 aaKnown RBP5.44□□□□□ -1.54
VPS41-211ENST00000466017 HEBP1Q9NRV9 189 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 INTS10Q9NVR2 710 aaKnown RBP5.44□□□□□ -1.54
VPS41-211ENST00000466017 PIH1D1Q9NWS0 290 aaKnown RBP5.44□□□□□ -1.54
VPS41-211ENST00000466017 PKD2L2Q9NZM6 624 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 TXNDC16Q9P2K2 825 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 KLHL42Q9P2K6 505 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 PKP3Q9Y446 797 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 PIAS3Q9Y6X2 628 aa5.44□□□□□ -1.54
VPS41-211ENST00000466017 CKAP5Q14008 2032 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 F5P12259 2224 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 TRANK1O15050 2925 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 MUC22E2RYF6 1773 aaPredicted RBP5.43□□□□□ -1.54
VPS41-211ENST00000466017 C1orf232A0A0U1RR37 186 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 A0A1W2PQF6 199 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 CCDC162PA2VCL2 907 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 SRRM3A6NNA2 597 aaPredicted RBP5.43□□□□□ -1.54
VPS41-211ENST00000466017 H3BQF6 201 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 TNRC18O15417 2968 aaPredicted RBP5.43□□□□□ -1.54
VPS41-211ENST00000466017 CD3EAPO15446 510 aaKnown RBP5.43□□□□□ -1.54
VPS41-211ENST00000466017 PRODHO43272 600 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 SYNCRIPO60506 623 aaKnown RBP5.43□□□□□ -1.54
VPS41-211ENST00000466017 ATG13O75143 517 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 RFPL1O75677 317 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 CLDN7O95471 211 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 GOT2P00505 430 aaKnown RBP5.43□□□□□ -1.54
VPS41-211ENST00000466017 EGFP01133 1207 aa5.43□□□□□ -1.54
VPS41-211ENST00000466017 IGLV3-19P01714 112 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms