RNA–Protein interactions for RNA: ENST00000461577.5

TRAPPC12-213, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-213ENST00000461577 DKK4Q9UBT3 224 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 ZMIZ1Q9ULJ6 1067 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 CFAP20Q9Y6A4 193 aaKnown RBP10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 RPS6KL1Q9Y6S9 549 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 COLEC10Q9Y6Z7 277 aa10.36□□□□□ -0.75
TRAPPC12-213ENST00000461577 PRAMEF33A0A0G2JMD5 474 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 IGHV5-10-1A0A0J9YXX1 117 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 UBA6A0AVT1 1052 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 EFCAB8A8MWE9 144 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 GOLGA8KD6RF30 607 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 GOLGA8TH3BQL2 631 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 SMAPO00193 183 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 PRMT5O14744 637 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 NDC80O14777 642 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 LIN7AO14910 233 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 PLD2O14939 933 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 USP1O94782 785 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 JMJD7P0C870 316 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 HOXB3P14651 431 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 ITGB6P18564 788 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 MPSTP25325 297 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 NDUFS1P28331 727 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 CSF2RBP32927 897 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 MAGEA3P43357 314 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 PREPP48147 710 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 CFHR1Q03591 330 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 CKAP4Q07065 602 aaKnown RBP10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 DHX9Q08211 1270 aaKnown RBP10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 C2orf54Q08AI8 447 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 RPA4Q13156 261 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 BOP1Q14137 746 aaKnown RBP10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 GPR18Q14330 331 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 BRD3Q15059 726 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 SNAP47Q5SQN1 464 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 RNF187Q5TA31 235 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 CAPRIN2Q6IMN6 1127 aaKnown RBP10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 DUS1LQ6P1R4 473 aaKnown RBP10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 WDR74Q6RFH5 385 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 ZNF574Q6ZN55 896 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 MAATS1Q7Z4T9 603 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 PROSER1Q86XN7 944 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 PLXDC1Q8IUK5 500 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 SPATA4Q8NEY3 305 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 SPDYE1Q8NFV5 336 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 ZNF592Q92610 1267 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 SNF8Q96H20 258 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 SIGLEC10Q96LC7 697 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 RMDN2Q96LZ7 410 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 FCRL3Q96P31 734 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 FERD3LQ96RJ6 166 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 CMKLR1Q99788 373 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 TMEM9Q9P0T7 183 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 GNPTGQ9UJJ9 305 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 LOXL2Q9Y4K0 774 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 PCDHGA8Q9Y5G5 932 aa10.35□□□□□ -0.75
TRAPPC12-213ENST00000461577 FAM187AA6NFU0 413 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 A8MU76 341 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 HGSO14964 777 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 URI1O94763 535 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 TNFSF15O95150 251 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 CAPNS1P04632 268 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 THRAP10827 490 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 OGNP20774 298 aaKnown RBP10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 IVDP26440 423 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 ARNTP27540 789 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 CSTF2P33240 577 aaKnown RBP eCLIP10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 CD151P48509 253 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 ITGA8P53708 1063 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 CSE1LP55060 971 aaKnown RBP10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 EIF3BP55884 814 aaKnown RBP10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 PLOD1Q02809 727 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 C16orf72Q14CZ0 275 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 LONRF1Q17RB8 773 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 TBC1D25Q3MII6 688 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 BBS9Q3SYG4 887 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 HIBCHQ6NVY1 386 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 NEPROQ6NW34 567 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 KLHL35Q6PF15 583 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 XKR5Q6UX68 686 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 NAPRTQ6XQN6 538 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 TMEM135Q86UB9 458 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 LRRC6Q86X45 466 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 PDIK1LQ8N165 341 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 BBOF1Q8ND07 529 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 RCBTB1Q8NDN9 531 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 CALML6Q8TD86 181 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 ZFPM2Q8WW38 1151 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 ZNF578Q96N58 590 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 PANX3Q96QZ0 392 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 TCF12Q99081 682 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 TRIM56Q9BRZ2 755 aaKnown RBP10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 CARD6Q9BX69 1037 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 OR52A5Q9H2C5 316 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 THSD1Q9NS62 852 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 C20orf96Q9NUD7 363 aaPredicted RBP10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 PISDQ9UG56 409 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 KLHL3Q9UH77 587 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 VPS9D1Q9Y2B5 631 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 SNX24Q9Y343 169 aa10.34□□□□□ -0.75
TRAPPC12-213ENST00000461577 A0A1W2PNU3 283 aaPredicted RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms