RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 MED4Q9NPJ6 270 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 ZNHIT2Q9UHR6 403 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 RAB23Q9ULC3 237 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 SMG5Q9UPR3 1016 aaKnown RBP11.04□□□□□ -0.64
TRAF4-206ENST00000454852 ST14Q9Y5Y6 855 aa11.04□□□□□ -0.64
TRAF4-206ENST00000454852 ATXN2Q99700 1313 aaKnown RBP11.04□□□□□ -0.64
TRAF4-206ENST00000454852 A0A1B0GVT2 93 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 A6NCN8 305 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 HMGB1P1B2RPK0 211 aaPredicted RBP11.03□□□□□ -0.64
TRAF4-206ENST00000454852 H3BM21 787 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 DLL1O00548 723 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 PHGDHO43175 533 aaKnown RBP11.03□□□□□ -0.64
TRAF4-206ENST00000454852 KLHL2O95198 593 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 MATN4O95460 622 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 RETP07949 1114 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 JUNDP17535 347 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 CRHR1P34998 444 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 MPLP40238 635 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 RGS4P49798 205 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 IL2P60568 153 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 ATP6V0D1P61421 351 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 CTBSQ01459 385 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 ILF3Q12906 894 aaKnown RBP eCLIP11.03□□□□□ -0.64
TRAF4-206ENST00000454852 CAPRIN2Q6IMN6 1127 aaKnown RBP11.03□□□□□ -0.64
TRAF4-206ENST00000454852 LVRNQ6Q4G3 990 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 ABRAXAS1Q6UWZ7 409 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 LAYNQ6UX15 382 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 CYHR1Q6ZMK1 362 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 FAM83HQ6ZRV2 1179 aaPredicted RBP11.03□□□□□ -0.64
TRAF4-206ENST00000454852 CHST15Q7LFX5 561 aaPredicted RBP11.03□□□□□ -0.64
TRAF4-206ENST00000454852 EXOC3L1Q86VI1 746 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 NRROSQ86YC3 692 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 HID1Q8IV36 788 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 CENPLQ8N0S6 344 aaPredicted RBP11.03□□□□□ -0.64
TRAF4-206ENST00000454852 BANPQ8N9N5 519 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 ANKRD49Q8WVL7 239 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 TMEM159Q96B96 161 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 ARL8AQ96BM9 186 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 GPR78Q96P69 363 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 ELF4Q99607 663 aaPredicted RBP11.03□□□□□ -0.64
TRAF4-206ENST00000454852 LRRC61Q9BV99 259 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 GSDMCQ9BYG8 508 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 SLC13A1Q9BZW2 595 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 TMEM168Q9H0V1 697 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 TM7SF3Q9NS93 570 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 IGSF5Q9NSI5 407 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 SPASTQ9UBP0 616 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 APOBEC3BQ9UH17 382 aaKnown RBP11.03□□□□□ -0.64
TRAF4-206ENST00000454852 DCDC2Q9UHG0 476 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 TLK1Q9UKI8 766 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 CSNK1G3Q9Y6M4 447 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 USP34Q70CQ2 3546 aa11.03□□□□□ -0.64
TRAF4-206ENST00000454852 A0A1B0GTQ1 180 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 SLC16A5O15375 505 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 TYROBPO43914 113 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 LRP3O75074 770 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 GLRA3O75311 464 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 SYPP08247 313 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 LTA4HP09960 611 aaKnown RBP11.02□□□□□ -0.65
TRAF4-206ENST00000454852 PYGBP11216 843 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 ACP5P13686 325 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 CD1DP15813 335 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 ITGB6P18564 788 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 KRT4P19013 534 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 SAT1P21673 171 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 IDSP22304 550 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 ACADLP28330 430 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 CCT5P48643 541 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 ARRB1P49407 418 aaPredicted RBP11.02□□□□□ -0.65
TRAF4-206ENST00000454852 HSPA14Q0VDF9 509 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 GRIK2Q13002 908 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 SP140Q13342 867 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 BOP1Q14137 746 aaKnown RBP11.02□□□□□ -0.65
TRAF4-206ENST00000454852 NFE2L1Q14494 772 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 ZNF460Q14592 562 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 ELOCQ15369 112 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 FAM83EQ2M2I3 478 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 TSNAXIP1Q2TAA8 658 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 TTMPQ5BVD1 217 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 ACSBG2Q5FVE4 666 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 PPM1JQ5JR12 505 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 RAPH1Q70E73 1250 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 TBC1D1Q86TI0 1168 aaPredicted RBP11.02□□□□□ -0.65
TRAF4-206ENST00000454852 PDZD3Q86UT5 571 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 CPNE9Q8IYJ1 553 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 CFAP206Q8IYR0 622 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 GOLGA6L1Q8N7Z2 621 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 FBXO15Q8NCQ5 510 aaPredicted RBP11.02□□□□□ -0.65
TRAF4-206ENST00000454852 RHEBL1Q8TAI7 183 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 APOPT1Q96IL0 206 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 SMC6Q96SB8 1091 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 TCEAL2Q9H3H9 227 aaPredicted RBP11.02□□□□□ -0.65
TRAF4-206ENST00000454852 TFB2MQ9H5Q4 396 aaKnown RBP11.02□□□□□ -0.65
TRAF4-206ENST00000454852 SARS2Q9NP81 518 aaKnown RBP11.02□□□□□ -0.65
TRAF4-206ENST00000454852 KLC4Q9NSK0 619 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 DNAJC28Q9NX36 388 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 MOSPD1Q9UJG1 213 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 NOVA2Q9UNW9 492 aaKnown RBP11.02□□□□□ -0.65
TRAF4-206ENST00000454852 PRKAB1Q9Y478 270 aa11.02□□□□□ -0.65
TRAF4-206ENST00000454852 GPSM3Q9Y4H4 160 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms