RNA–Protein interactions for RNA: ENST00000453024.5

CTNNB1-210, Transcript of catenin beta 1, humanhuman

TSL 2 BASIC

Gene CTNNB1, Length 2,841 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNB1-210ENST00000453024 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 LEF1Q9UJU2 399 aaPredicted RBP16.41■□□□□ 0.22
CTNNB1-210ENST00000453024 DOCK5Q9H7D0 1870 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 A0A087WZ62 844 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 LRRC14BA6NHZ5 514 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 MSCO60682 206 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 CYP7B1O75881 506 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 ITGB3P05106 788 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 NFKB1P19838 968 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 POU3F3P20264 500 aaPredicted RBP16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 ETV6P41212 452 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 HNF4AP41235 474 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 MLLT6P55198 1093 aaPredicted RBP16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 SOWAHAQ2M3V2 549 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 PRR5LQ6MZQ0 368 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 ESRP1Q6NXG1 681 aaKnown RBP16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 AHSA2Q719I0 299 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 ANKRD49Q8WVL7 239 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 PPM1MQ96MI6 270 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 PSKH2Q96QS6 385 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 CCDC32Q9BV29 185 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 GLIS2Q9BZE0 524 aaPredicted RBP16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 ALG9Q9H6U8 611 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 CCDC59Q9P031 241 aaKnown RBP16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 FEM1BQ9UK73 627 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 KLHL20Q9Y2M5 609 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 MGAMO43451 1857 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 AGRPO00253 132 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 NFICP08651 508 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 LTA4HP09960 611 aaKnown RBP16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 GGT1P19440 569 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 NOS2P35228 1153 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 AAK1Q2M2I8 961 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 ARMC4Q5T2S8 1044 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 ARHGEF16Q5VV41 709 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 UBE2Q1Q7Z7E8 422 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 TMEM192Q8IY95 271 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 EID3Q8N140 333 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 PNPLA1Q8N8W4 532 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 RNF139Q8WU17 664 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 METTL2AQ96IZ6 378 aaKnown RBP16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 TEX13BQ9BXU2 312 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 RIBC2Q9H4K1 309 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 SMPD4Q9NXE4 827 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 GLTPQ9NZD2 209 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 SLC2A6Q9UGQ3 507 aa16.4■□□□□ 0.22
CTNNB1-210ENST00000453024 TYW5A2RUC4 315 aaKnown RBP16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 UGT2B17O75795 530 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 RECQL5O94762 991 aaPredicted RBP16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 ERP29P30040 261 aaKnown RBP16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 WEE1P30291 646 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 UGT2B15P54855 530 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 IL1RL1Q01638 556 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 CCNJQ5T5M9 372 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 PPP1R26Q5T8A7 1209 aaPredicted RBP16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 NECAB2Q7Z6G3 386 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 SETD9Q8NE22 299 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 OR5K1Q8NHB7 308 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 EXT2Q93063 718 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 SLC47A1Q96FL8 570 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 ACTR8Q9H981 624 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 EIF3KQ9UBQ5 218 aaKnown RBP16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 ZMAT5Q9UDW3 170 aaKnown RBP16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 LIMD1Q9UGP4 676 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 FZD10Q9ULW2 581 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 PCDHGB2Q9Y5G2 931 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 ORC6Q9Y5N6 252 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 A8MUA0 341 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 AZIN1O14977 448 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 ARHGEF9O43307 516 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 ITGAMP11215 1152 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 CA5AP35218 305 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 TKTL1P51854 596 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 MAPK12P53778 367 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 POU4F1Q01851 419 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 CRY2Q49AN0 593 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 ZNF789Q5FWF6 425 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 ABHD15Q6UXT9 468 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 TSPEARQ8WU66 669 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 TMEM80Q96HE8 168 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 APOL4Q9BPW4 351 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 MRPL4Q9BYD3 311 aaKnown RBP16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 ZC3H12CQ9C0D7 883 aaKnown RBP16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.39■□□□□ 0.212e-8■■■□□ 19.2
CTNNB1-210ENST00000453024 PCDH10Q9P2E7 1040 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 PKP3Q9Y446 797 aa16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 COL11A2P13942 1736 aaPredicted RBP16.39■□□□□ 0.21
CTNNB1-210ENST00000453024 BBOX1O75936 387 aa16.38■□□□□ 0.21
CTNNB1-210ENST00000453024 SIX3O95343 332 aaPredicted RBP16.38■□□□□ 0.21
CTNNB1-210ENST00000453024 PDGFAP04085 211 aa16.38■□□□□ 0.21
CTNNB1-210ENST00000453024 SERPINF2P08697 491 aa16.38■□□□□ 0.21
CTNNB1-210ENST00000453024 CXCL8P10145 99 aa16.38■□□□□ 0.21
CTNNB1-210ENST00000453024 KRT20P35900 424 aa16.38■□□□□ 0.21
CTNNB1-210ENST00000453024 CAP2P40123 477 aa16.38■□□□□ 0.21
CTNNB1-210ENST00000453024 RPS5P46782 204 aaKnown RBP16.38■□□□□ 0.21
CTNNB1-210ENST00000453024 PPP3CCP48454 512 aa16.38■□□□□ 0.21
CTNNB1-210ENST00000453024 CXCR4P61073 352 aa16.38■□□□□ 0.21
CTNNB1-210ENST00000453024 CDH17Q12864 832 aa16.38■□□□□ 0.21
CTNNB1-210ENST00000453024 UBE2FQ969M7 185 aa16.38■□□□□ 0.21
CTNNB1-210ENST00000453024 L3HYPDHQ96EM0 354 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms