RNA–Protein interactions for RNA: ENST00000442679.5

USP1-203, Transcript of ubiquitin specific peptidase 1, humanhuman

TSL 2

Gene USP1, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-203ENST00000442679 B4GAT1O43505 415 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 MT-CO3P00414 261 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 ESR1P03372 595 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 RPLP0P05388 317 aaKnown RBP12.07□□□□□ -0.48
USP1-203ENST00000442679 SLC35G4P0C7Q5 338 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 JUPP14923 745 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 PDHA2P29803 388 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 SLC1A2P43004 574 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 PREPP48147 710 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 CARSP49589 748 aaKnown RBP12.07□□□□□ -0.48
USP1-203ENST00000442679 UBE2IP63279 158 aaKnown RBP12.07□□□□□ -0.48
USP1-203ENST00000442679 RPA4Q13156 261 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 FRG1Q14331 258 aaKnown RBP12.07□□□□□ -0.48
USP1-203ENST00000442679 BRD3Q15059 726 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 SYTL3Q4VX76 610 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 ZNF789Q5FWF6 425 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 HES3Q5TGS1 186 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 NAPRTQ6XQN6 538 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 TMPRSS7Q7RTY8 843 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 SPRED1Q7Z699 444 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 CCDC25Q86WR0 208 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 TMPRSS12Q86WS5 348 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 ZNF761Q86XN6 746 aaPredicted RBP12.07□□□□□ -0.48
USP1-203ENST00000442679 PALM2Q8IXS6 379 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 KRT222Q8N1A0 295 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 GALNT15Q8N3T1 639 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 WDR48Q8TAF3 677 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 IFT81Q8WYA0 676 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 CERS2Q96G23 380 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 BIRC8Q96P09 236 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 GFM1Q96RP9 751 aaKnown RBP12.07□□□□□ -0.48
USP1-203ENST00000442679 INSM2Q96T92 566 aaPredicted RBP12.07□□□□□ -0.48
USP1-203ENST00000442679 FOXP3Q9BZS1 431 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 LRRN3Q9H3W5 708 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 L2HGDHQ9H9P8 463 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 ZDHHC18Q9NUE0 388 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 FBXO5Q9UKT4 447 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 PCDHB1Q9Y5F3 818 aa12.07□□□□□ -0.48
USP1-203ENST00000442679 CNOT1A5YKK6 2376 aaKnown RBP12.06□□□□□ -0.48
USP1-203ENST00000442679 PRAMEF33A0A0G2JMD5 474 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 H3BMM5 538 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 HAUS5O94927 633 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 F7P08709 466 aaPredicted RBP12.06□□□□□ -0.48
USP1-203ENST00000442679 SPINK2P20155 84 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 AOAHP28039 575 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 CCR7P32248 378 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 DEKP35659 375 aaKnown RBP12.06□□□□□ -0.48
USP1-203ENST00000442679 CSE1LP55060 971 aaKnown RBP12.06□□□□□ -0.48
USP1-203ENST00000442679 ADARP55265 1226 aaKnown RBP12.06□□□□□ -0.48
USP1-203ENST00000442679 MPP1Q00013 466 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 PLOD1Q02809 727 aaPredicted RBP12.06□□□□□ -0.48
USP1-203ENST00000442679 BOP1Q14137 746 aaKnown RBP12.06□□□□□ -0.48
USP1-203ENST00000442679 NR1D2Q14995 579 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 AMZ1Q400G9 498 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 CTSL3PQ5NE16 218 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 CDCP2Q5VXM1 449 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 CAPRIN2Q6IMN6 1127 aaKnown RBP12.06□□□□□ -0.48
USP1-203ENST00000442679 TRMT10BQ6PF06 316 aaKnown RBP12.06□□□□□ -0.48
USP1-203ENST00000442679 RBM12BQ8IXT5 1001 aaKnown RBP12.06□□□□□ -0.48
USP1-203ENST00000442679 C2CD4AQ8NCU7 369 aaPredicted RBP12.06□□□□□ -0.48
USP1-203ENST00000442679 GSDMBQ8TAX9 411 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 LKAAEAR1Q8TD35 194 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 RMDN2Q96LZ7 410 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 C12orf66Q96MD2 445 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 PANX3Q96QZ0 392 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 SCNM1Q9BWG6 230 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.06□□□□□ -0.48
USP1-203ENST00000442679 PHACTR1Q9C0D0 580 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 OR52A5Q9H2C5 316 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 UCK1Q9HA47 277 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 SLC40A1Q9NP59 571 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 POT1Q9NUX5 634 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 IMP3Q9NV31 184 aaKnown RBP12.06□□□□□ -0.48
USP1-203ENST00000442679 KCNK4Q9NYG8 393 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 WASF3Q9UPY6 502 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 CFAP20Q9Y6A4 193 aaKnown RBP12.06□□□□□ -0.48
USP1-203ENST00000442679 CACNA1AO00555 2505 aa12.06□□□□□ -0.48
USP1-203ENST00000442679 IGHV1OR21-1A0A087WYE8 117 aa12.05□□□□□ -0.48
USP1-203ENST00000442679 A0A1W2PQM1 296 aa12.05□□□□□ -0.48
USP1-203ENST00000442679 SLC5A10A0PJK1 596 aa12.05□□□□□ -0.48
USP1-203ENST00000442679 FAM149AA5PLN7 773 aa12.05□□□□□ -0.48
USP1-203ENST00000442679 IFRD1O00458 451 aaPredicted RBP12.05□□□□□ -0.48
USP1-203ENST00000442679 NTN3O00634 580 aaPredicted RBP12.05□□□□□ -0.48
USP1-203ENST00000442679 KPNA5O15131 536 aa12.05□□□□□ -0.48
USP1-203ENST00000442679 TCEA3O75764 348 aa12.05□□□□□ -0.48
USP1-203ENST00000442679 APOA4P06727 396 aa12.05□□□□□ -0.48
USP1-203ENST00000442679 MTHFD1P11586 935 aaKnown RBP12.05□□□□□ -0.48
USP1-203ENST00000442679 PKMP14618 531 aaKnown RBP12.05□□□□□ -0.48
USP1-203ENST00000442679 CHRM3P20309 590 aa12.05□□□□□ -0.48
USP1-203ENST00000442679 CD1CP29017 333 aa12.05□□□□□ -0.48
USP1-203ENST00000442679 MAGEA4P43358 317 aa12.05□□□□□ -0.48
USP1-203ENST00000442679 LEPRP48357 1165 aaKnown RBP12.05□□□□□ -0.48
USP1-203ENST00000442679 CD151P48509 253 aa12.05□□□□□ -0.48
USP1-203ENST00000442679 PPM1FP49593 454 aaPredicted RBP12.05□□□□□ -0.48
USP1-203ENST00000442679 MGAT5Q09328 741 aa12.05□□□□□ -0.48
USP1-203ENST00000442679 HSPA14Q0VDF9 509 aa12.05□□□□□ -0.48
USP1-203ENST00000442679 TARDBPQ13148 414 aaKnown RBP eCLIP12.05□□□□□ -0.48
USP1-203ENST00000442679 SPIDRQ14159 915 aa12.05□□□□□ -0.48
USP1-203ENST00000442679 KRT33BQ14525 404 aa12.05□□□□□ -0.48
USP1-203ENST00000442679 TEDDM1Q5T9Z0 273 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms