RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 MTERF2Q49AM1 385 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 RBM20Q5T481 1227 aaKnown RBP15.87■□□□□ 0.13
C9orf3-206ENST00000428313 SWSAP1Q6NVH7 229 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 SYVN1Q86TM6 617 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 HIPK1Q86Z02 1210 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 SYTL5Q8TDW5 730 aaPredicted RBP15.87■□□□□ 0.13
C9orf3-206ENST00000428313 FRS2Q8WU20 508 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 TWIST2Q8WVJ9 160 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 PMEPA1Q969W9 287 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 TOE1Q96GM8 510 aaKnown RBP15.87■□□□□ 0.13
C9orf3-206ENST00000428313 CCDC120Q96HB5 630 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 CEP19Q96LK0 163 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 SLC30A2Q9BRI3 323 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 MAGEB5Q9BZ81 275 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 GORASP2Q9H8Y8 452 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 SETD4Q9NVD3 440 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 FEM1BQ9UK73 627 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 CLRN2A0PK11 232 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 ATP6V1G2-DDX39BF2Z307 99 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 PIP5K1BO14986 540 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 FAM20BO75063 409 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 HGFP14210 728 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 XKR3Q5GH77 459 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 KANK2Q63ZY3 851 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 ANKRD34AQ69YU3 496 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 LAIR1Q6GTX8 287 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 AMIGO1Q86WK6 493 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 ZDHHC17Q8IUH5 632 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 ABI1Q8IZP0 508 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 PHF21BQ96EK2 531 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 MLPHQ9BV36 600 aaPredicted RBP15.87■□□□□ 0.13
C9orf3-206ENST00000428313 CHST12Q9NRB3 414 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 FBXO10Q9UK96 956 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 TSPAN16Q9UKR8 245 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 TMPRSS11EQ9UL52 423 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 TLR6Q9Y2C9 796 aa15.87■□□□□ 0.13
C9orf3-206ENST00000428313 OR6C70A6NIJ9 312 aa15.86■□□□□ 0.13
C9orf3-206ENST00000428313 C1QBP02746 253 aa15.86■□□□□ 0.13
C9orf3-206ENST00000428313 HLA-DMAP28067 261 aa15.86■□□□□ 0.13
C9orf3-206ENST00000428313 CSTF2P33240 577 aaKnown RBP eCLIP15.86■□□□□ 0.131e-6■■■□□ 15.5
C9orf3-206ENST00000428313 SOX6P35712 828 aa15.86■□□□□ 0.13
C9orf3-206ENST00000428313 PLK1P53350 603 aa15.86■□□□□ 0.13
C9orf3-206ENST00000428313 NFKB2Q00653 900 aa15.86■□□□□ 0.13
C9orf3-206ENST00000428313 CDH17Q12864 832 aa15.86■□□□□ 0.13
C9orf3-206ENST00000428313 PAFAH1B3Q15102 231 aaKnown RBP15.86■□□□□ 0.13
C9orf3-206ENST00000428313 OR8H2Q8N162 312 aa15.86■□□□□ 0.13
C9orf3-206ENST00000428313 DPP10Q8N608 796 aa15.86■□□□□ 0.13
C9orf3-206ENST00000428313 GLB1L3Q8NCI6 653 aaPredicted RBP15.86■□□□□ 0.13
C9orf3-206ENST00000428313 OR10Z1Q8NGY1 313 aa15.86■□□□□ 0.13
C9orf3-206ENST00000428313 GPRASP2Q96D09 838 aa15.86■□□□□ 0.13
C9orf3-206ENST00000428313 CDHR5Q9HBB8 845 aa15.86■□□□□ 0.13
C9orf3-206ENST00000428313 PRDM8Q9NQV8 689 aa15.86■□□□□ 0.13
C9orf3-206ENST00000428313 INTS7Q9NVH2 962 aaKnown RBP15.86■□□□□ 0.13
C9orf3-206ENST00000428313 GIMAP2Q9UG22 337 aa15.86■□□□□ 0.13
C9orf3-206ENST00000428313 COL1A2P08123 1366 aa15.86■□□□□ 0.13
C9orf3-206ENST00000428313 A0A0U1RQS6 177 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 AZIN1O14977 448 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 MYCLP12524 364 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-206ENST00000428313 HOXB6P17509 224 aaKnown RBP15.85■□□□□ 0.13
C9orf3-206ENST00000428313 ATF4P18848 351 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-206ENST00000428313 LIMK1P53667 647 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 SNX16P57768 344 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 DSTNP60981 165 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 IKZF1Q13422 519 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 SNTA1Q13424 505 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 GBX1Q14549 363 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 MXD4Q14582 209 aaPredicted RBP15.85■□□□□ 0.13
C9orf3-206ENST00000428313 UNC50Q53HI1 259 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 ARMCX4Q5H9R4 360 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 SLC46A3Q7Z3Q1 461 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 DENND6AQ8IWF6 608 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 TUBGCP3Q96CW5 907 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 SLC47A1Q96FL8 570 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 CARS2Q9HA77 564 aaKnown RBP15.85■□□□□ 0.13
C9orf3-206ENST00000428313 SPON1Q9HCB6 807 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 AIG1Q9NVV5 245 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 POLG2Q9UHN1 485 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 CFL2Q9Y281 166 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 KCNE2Q9Y6J6 123 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 A0A075B6Q4 140 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 F9P00740 461 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 SUPT20HL2P0C7V6 817 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 CPB1P15086 417 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 NOS2P35228 1153 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 RGS7P49802 495 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 CTBP1Q13363 440 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 SYT16Q17RD7 645 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 STYK1Q6J9G0 422 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 RDH10Q8IZV5 341 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 OR52E4Q8NGH9 312 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 ACER1Q8TDN7 264 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 GABARAPL1Q9H0R8 117 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 ACTR8Q9H981 624 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 ZNF304Q9HCX3 659 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 ASAH2Q9NR71 780 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 ERVK13-1Q9NX77 482 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 BTRCQ9Y297 605 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 KLHL20Q9Y2M5 609 aa15.85■□□□□ 0.13
C9orf3-206ENST00000428313 DICER1Q9UPY3 1922 aaKnown RBP15.85■□□□□ 0.13
C9orf3-206ENST00000428313 M0R082 166 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms