RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 AGGF1Q8N302 714 aaeCLIP17.63■□□□□ 0.41
HERC3-205ENST00000426683 FBXO39Q8N4B4 442 aa17.63■□□□□ 0.41
HERC3-205ENST00000426683 SPATA4Q8NEY3 305 aa17.63■□□□□ 0.41
HERC3-205ENST00000426683 ELMO1Q92556 727 aa17.63■□□□□ 0.41
HERC3-205ENST00000426683 PRR11Q96HE9 360 aaPredicted RBP17.63■□□□□ 0.41
HERC3-205ENST00000426683 SIGLEC10Q96LC7 697 aa17.63■□□□□ 0.41
HERC3-205ENST00000426683 FCRL3Q96P31 734 aaPredicted RBP17.63■□□□□ 0.41
HERC3-205ENST00000426683 LOXL2Q9Y4K0 774 aa17.63■□□□□ 0.41
HERC3-205ENST00000426683 RPS6KL1Q9Y6S9 549 aa17.63■□□□□ 0.41
HERC3-205ENST00000426683 KNTC1P50748 2209 aa17.63■□□□□ 0.41
HERC3-205ENST00000426683 F8W8V4 182 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 PLD2O14939 933 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 NDUFS3O75489 264 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 UBXN7O94888 489 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 THRAP10827 490 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 HGFP14210 728 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 TYRP1P17643 537 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 AMD1P17707 334 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 ITGB6P18564 788 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 RBMS1P29558 406 aaKnown RBP17.62■□□□□ 0.41
HERC3-205ENST00000426683 PDHA2P29803 388 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 PREPP48147 710 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 ARCN1P48444 511 aaKnown RBP17.62■□□□□ 0.41
HERC3-205ENST00000426683 C2orf54Q08AI8 447 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 RPA4Q13156 261 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 C16orf72Q14CZ0 275 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 MRNIPQ6NTE8 343 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 WDR74Q6RFH5 385 aaPredicted RBP17.62■□□□□ 0.41
HERC3-205ENST00000426683 TMEM135Q86UB9 458 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 RCBTB1Q8NDN9 531 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 STAMBPL1Q96FJ0 436 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 CMKLR1Q99788 373 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 TRIM31Q9BZY9 425 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 OR52A5Q9H2C5 316 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 OGFRQ9NZT2 677 aa17.62■□□□□ 0.41
HERC3-205ENST00000426683 ACACBO00763 2458 aa17.61■□□□□ 0.41
HERC3-205ENST00000426683 CHD8Q9HCK8 2581 aa17.61■□□□□ 0.41
HERC3-205ENST00000426683 IFRD1O00458 451 aaPredicted RBP17.61■□□□□ 0.41
HERC3-205ENST00000426683 PRMT5O14744 637 aaPredicted RBP17.61■□□□□ 0.41
HERC3-205ENST00000426683 LIN7AO14910 233 aaPredicted RBP17.61■□□□□ 0.41
HERC3-205ENST00000426683 DXOO77932 396 aaKnown RBP17.61■□□□□ 0.41
HERC3-205ENST00000426683 USP1O94782 785 aa17.61■□□□□ 0.41
HERC3-205ENST00000426683 TNFSF15O95150 251 aa17.61■□□□□ 0.41
HERC3-205ENST00000426683 MRPS25P82663 173 aaKnown RBP17.61■□□□□ 0.41
HERC3-205ENST00000426683 TRA2AQ13595 282 aaKnown RBP eCLIP17.61■□□□□ 0.41
HERC3-205ENST00000426683 BOP1Q14137 746 aaKnown RBP17.61■□□□□ 0.41
HERC3-205ENST00000426683 KRT33BQ14525 404 aa17.61■□□□□ 0.41
HERC3-205ENST00000426683 MORF4L2Q15014 288 aa17.61■□□□□ 0.41
HERC3-205ENST00000426683 BRD3Q15059 726 aa17.61■□□□□ 0.41
HERC3-205ENST00000426683 PLCL1Q15111 1095 aa17.61■□□□□ 0.41
HERC3-205ENST00000426683 TBC1D25Q3MII6 688 aa17.61■□□□□ 0.41
HERC3-205ENST00000426683 SYTL3Q4VX76 610 aa17.61■□□□□ 0.41
HERC3-205ENST00000426683 SNAP47Q5SQN1 464 aa17.61■□□□□ 0.41
HERC3-205ENST00000426683 NAPRTQ6XQN6 538 aa17.61■□□□□ 0.41
HERC3-205ENST00000426683 SDCCAG8Q86SQ7 713 aaPredicted RBP17.61■□□□□ 0.41
HERC3-205ENST00000426683 JPH3Q8WXH2 748 aaPredicted RBP17.61■□□□□ 0.41
HERC3-205ENST00000426683 TMEM159Q96B96 161 aa17.61■□□□□ 0.41
HERC3-205ENST00000426683 SLC46A1Q96NT5 459 aa17.61■□□□□ 0.41
HERC3-205ENST00000426683 TSSK1BQ9BXA7 367 aa17.61■□□□□ 0.41
HERC3-205ENST00000426683 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.61■□□□□ 0.41
HERC3-205ENST00000426683 IL1RAPL1Q9NZN1 696 aa17.61■□□□□ 0.41
HERC3-205ENST00000426683 AKAP7Q9P0M2 348 aaPredicted RBP17.61■□□□□ 0.41
HERC3-205ENST00000426683 PISDQ9UG56 409 aa17.61■□□□□ 0.41
HERC3-205ENST00000426683 RAXQ9Y2V3 346 aa17.61■□□□□ 0.41
HERC3-205ENST00000426683 COLEC10Q9Y6Z7 277 aa17.61■□□□□ 0.41
HERC3-205ENST00000426683 FRYQ5TBA9 3013 aa17.61■□□□□ 0.41
HERC3-205ENST00000426683 ASPMQ8IZT6 3477 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 ZCWPW2A0A1B0GU75 182 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 IQCF5A8MTL0 148 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 A8MU76 341 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 EFCAB8A8MWE9 144 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 HGSO14964 777 aaPredicted RBP17.6■□□□□ 0.41
HERC3-205ENST00000426683 TLX3O43711 291 aaPredicted RBP17.6■□□□□ 0.41
HERC3-205ENST00000426683 JMJD7P0C870 316 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 CD151P48509 253 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 ITGA8P53708 1063 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 DHX9Q08211 1270 aaKnown RBP17.6■□□□□ 0.41
HERC3-205ENST00000426683 TYSND1Q2T9J0 566 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 DNAJC21Q5F1R6 531 aaKnown RBP17.6■□□□□ 0.41
HERC3-205ENST00000426683 PTRHD1Q6GMV3 140 aaKnown RBP17.6■□□□□ 0.41
HERC3-205ENST00000426683 HIBCHQ6NVY1 386 aaPredicted RBP17.6■□□□□ 0.41
HERC3-205ENST00000426683 NEPROQ6NW34 567 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 IGF2-ASQ6U949 168 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 PLXDC1Q8IUK5 500 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 LKAAEAR1Q8TD35 194 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 RSC1A1Q92681 617 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 TRIM44Q96DX7 344 aaPredicted RBP17.6■□□□□ 0.41
HERC3-205ENST00000426683 SNF8Q96H20 258 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 ZNF578Q96N58 590 aaPredicted RBP17.6■□□□□ 0.41
HERC3-205ENST00000426683 FERD3LQ96RJ6 166 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 CARD6Q9BX69 1037 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 P2RY12Q9H244 342 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 ASCL3Q9NQ33 180 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 PDP2Q9P2J9 529 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 KLHL3Q9UH77 587 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 GNPTGQ9UJJ9 305 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 HEBP2Q9Y5Z4 205 aa17.6■□□□□ 0.41
HERC3-205ENST00000426683 TPRP12270 2363 aaKnown RBP17.6■□□□□ 0.41
HERC3-205ENST00000426683 UBA6A0AVT1 1052 aaPredicted RBP17.59■□□□□ 0.41
HERC3-205ENST00000426683 SLC5A10A0PJK1 596 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms