RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 HERPUD2Q9BSE4 406 aa3.93□□□□□ -1.78
LINC01040-201ENST00000425048 FUCA2Q9BTY2 467 aa3.93□□□□□ -1.78
LINC01040-201ENST00000425048 PITPNM3Q9BZ71 974 aa3.93□□□□□ -1.78
LINC01040-201ENST00000425048 MIOSQ9NXC5 875 aa3.93□□□□□ -1.78
LINC01040-201ENST00000425048 TRMT1Q9NXH9 659 aaKnown RBP3.93□□□□□ -1.78
LINC01040-201ENST00000425048 EPHA6Q9UF33 1036 aa3.93□□□□□ -1.78
LINC01040-201ENST00000425048 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.93□□□□□ -1.78
LINC01040-201ENST00000425048 DBNLQ9UJU6 430 aaKnown RBP3.93□□□□□ -1.78
LINC01040-201ENST00000425048 RARRES3Q9UL19 164 aa3.93□□□□□ -1.78
LINC01040-201ENST00000425048 R3HDM2Q9Y2K5 976 aaKnown RBP3.93□□□□□ -1.78
LINC01040-201ENST00000425048 PRRC2AP48634 2157 aaKnown RBP3.92□□□□□ -1.78
LINC01040-201ENST00000425048 TMEM189-UBE2V1I3L0A0 370 aa3.92□□□□□ -1.78
LINC01040-201ENST00000425048 KLF11O14901 512 aa3.92□□□□□ -1.78
LINC01040-201ENST00000425048 NXPH2O95156 264 aa3.92□□□□□ -1.78
LINC01040-201ENST00000425048 POLBP06746 335 aa3.92□□□□□ -1.78
LINC01040-201ENST00000425048 HALP42357 657 aa3.92□□□□□ -1.78
LINC01040-201ENST00000425048 RHBDL3P58872 404 aa3.92□□□□□ -1.78
LINC01040-201ENST00000425048 UBE2V1Q13404 147 aa3.92□□□□□ -1.78
LINC01040-201ENST00000425048 NAB2Q15742 525 aa3.92□□□□□ -1.78
LINC01040-201ENST00000425048 HLA-BQ31612 363 aa3.92□□□□□ -1.78
LINC01040-201ENST00000425048 ZDHHC20Q5W0Z9 365 aa3.92□□□□□ -1.78
LINC01040-201ENST00000425048 ZNF584Q8IVC4 421 aa3.92□□□□□ -1.78
LINC01040-201ENST00000425048 HACE1Q8IYU2 909 aa3.92□□□□□ -1.78
LINC01040-201ENST00000425048 ZFAND2BQ8WV99 257 aa3.92□□□□□ -1.78
LINC01040-201ENST00000425048 HSD17B8Q92506 261 aa3.92□□□□□ -1.78
LINC01040-201ENST00000425048 FAM149B1Q96BN6 582 aa3.92□□□□□ -1.78
LINC01040-201ENST00000425048 NSMCE3Q96MG7 304 aa3.92□□□□□ -1.78
LINC01040-201ENST00000425048 ASTN2O75129 1339 aaPredicted RBP3.92□□□□□ -1.78
LINC01040-201ENST00000425048 KDM3AQ9Y4C1 1321 aa3.92□□□□□ -1.78
LINC01040-201ENST00000425048 KLLNB2CW77 178 aa3.91□□□□□ -1.78
LINC01040-201ENST00000425048 SEC14L2O76054 403 aa3.91□□□□□ -1.78
LINC01040-201ENST00000425048 LDHAP00338 332 aaKnown RBP3.91□□□□□ -1.78
LINC01040-201ENST00000425048 ACADMP11310 421 aa3.91□□□□□ -1.78
LINC01040-201ENST00000425048 ABCD3P28288 659 aa3.91□□□□□ -1.78
LINC01040-201ENST00000425048 HUNKP57058 714 aa3.91□□□□□ -1.78
LINC01040-201ENST00000425048 GSDMDP57764 484 aa3.91□□□□□ -1.78
LINC01040-201ENST00000425048 OLR1P78380 273 aa3.91□□□□□ -1.78
LINC01040-201ENST00000425048 IL27RAQ6UWB1 636 aa3.91□□□□□ -1.78
LINC01040-201ENST00000425048 DCLK2Q8N568 766 aa3.91□□□□□ -1.78
LINC01040-201ENST00000425048 PRSS33Q8NF86 280 aa3.91□□□□□ -1.78
LINC01040-201ENST00000425048 ZPLD1Q8TCW7 415 aa3.91□□□□□ -1.78
LINC01040-201ENST00000425048 ANP32EQ9BTT0 268 aa3.91□□□□□ -1.78
LINC01040-201ENST00000425048 PANK3Q9H999 370 aa3.91□□□□□ -1.78
LINC01040-201ENST00000425048 MBNL1Q9NR56 388 aaKnown RBP3.91□□□□□ -1.78
LINC01040-201ENST00000425048 TAB2Q9NYJ8 693 aa3.91□□□□□ -1.78
LINC01040-201ENST00000425048 NUDT4Q9NZJ9 180 aa3.91□□□□□ -1.78
LINC01040-201ENST00000425048 NAALADL1Q9UQQ1 740 aa3.91□□□□□ -1.78
LINC01040-201ENST00000425048 CROCCQ5TZA2 2017 aa3.9□□□□□ -1.78
LINC01040-201ENST00000425048 MYH15Q9Y2K3 1946 aa3.9□□□□□ -1.78
LINC01040-201ENST00000425048 MEX3AA1L020 520 aaKnown RBP3.9□□□□□ -1.79
LINC01040-201ENST00000425048 SMAD9O15198 467 aaKnown RBP3.9□□□□□ -1.79
LINC01040-201ENST00000425048 HOXC11O43248 304 aaPredicted RBP3.9□□□□□ -1.79
LINC01040-201ENST00000425048 PIP5K1CO60331 668 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 TMCC2O75069 709 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 IPO7O95373 1038 aaKnown RBP3.9□□□□□ -1.79
LINC01040-201ENST00000425048 PIGNO95427 931 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 IGKV3-15P01624 115 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 HIST1H2ABP04908 130 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 ZSCAN5DPP0CG00 497 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 HIST1H2ADP20671 130 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 TFAP4Q01664 338 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 LRMPQ12912 555 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 CSTF3Q12996 717 aaKnown RBP3.9□□□□□ -1.79
LINC01040-201ENST00000425048 GAGE2BQ13066 116 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 PRKAA1Q13131 559 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 MEP1AQ16819 746 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 GRAMD1BQ3KR37 738 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 GAGE2EQ4V326 116 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 DCAF10Q5QP82 559 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 SLC9C2Q5TAH2 1124 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 FAM109BQ6ICB4 259 aaPredicted RBP3.9□□□□□ -1.79
LINC01040-201ENST00000425048 GAGE2AQ6NT46 116 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 CORO6Q6QEF8 472 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 CYP26C1Q6V0L0 522 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 HIST3H2AQ7L7L0 130 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 CEP97Q8IW35 865 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 INTS12Q96CB8 462 aaKnown RBP3.9□□□□□ -1.79
LINC01040-201ENST00000425048 USP28Q96RU2 1077 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 MYADMQ96S97 322 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 ARPC5LQ9BPX5 153 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 GAGE2DQ9UEU5 116 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 COMMD10Q9Y6G5 202 aa3.9□□□□□ -1.79
LINC01040-201ENST00000425048 CCDC180Q9P1Z9 1646 aa3.89□□□□□ -1.79
LINC01040-201ENST00000425048 MSGN1A6NI15 193 aa3.89□□□□□ -1.79
LINC01040-201ENST00000425048 H3BQ06 376 aaPredicted RBP3.89□□□□□ -1.79
LINC01040-201ENST00000425048 SOCS3O14543 225 aa3.89□□□□□ -1.79
LINC01040-201ENST00000425048 EPHA8P29322 1005 aaPredicted RBP3.89□□□□□ -1.79
LINC01040-201ENST00000425048 PSMC4P43686 418 aa3.89□□□□□ -1.79
LINC01040-201ENST00000425048 TMEM115Q12893 351 aaPredicted RBP3.89□□□□□ -1.79
LINC01040-201ENST00000425048 NFATC2Q13469 925 aa3.89□□□□□ -1.79
LINC01040-201ENST00000425048 TAF13Q15543 124 aa3.89□□□□□ -1.79
LINC01040-201ENST00000425048 TSPAN33Q86UF1 283 aa3.89□□□□□ -1.79
LINC01040-201ENST00000425048 MARVELD2Q8N4S9 558 aa3.89□□□□□ -1.79
LINC01040-201ENST00000425048 OR1J1Q8NGS3 322 aa3.89□□□□□ -1.79
LINC01040-201ENST00000425048 DYRK2Q92630 601 aa3.89□□□□□ -1.79
LINC01040-201ENST00000425048 GCC1Q96CN9 775 aa3.89□□□□□ -1.79
LINC01040-201ENST00000425048 WWTR1Q9GZV5 400 aa3.89□□□□□ -1.79
LINC01040-201ENST00000425048 KAT14Q9H8E8 782 aa3.89□□□□□ -1.79
LINC01040-201ENST00000425048 SCPEP1Q9HB40 452 aa3.89□□□□□ -1.79
LINC01040-201ENST00000425048 ACKR4Q9NPB9 350 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms