RNA–Protein interactions for RNA: ENST00000423251.1

MCF2L-214, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-214ENST00000423251 FAM83HQ6ZRV2 1179 aaPredicted RBP18.37■□□□□ 0.53
MCF2L-214ENST00000423251 PDZD3Q86UT5 571 aa18.37■□□□□ 0.53
MCF2L-214ENST00000423251 KCNMB4Q86W47 210 aa18.37■□□□□ 0.53
MCF2L-214ENST00000423251 ANKMY2Q8IV38 441 aa18.37■□□□□ 0.53
MCF2L-214ENST00000423251 ZBED8Q8IZ13 594 aa18.37■□□□□ 0.53
MCF2L-214ENST00000423251 GALNT15Q8N3T1 639 aa18.37■□□□□ 0.53
MCF2L-214ENST00000423251 PYROXD1Q8WU10 500 aa18.37■□□□□ 0.53
MCF2L-214ENST00000423251 HNRNPLLQ8WVV9 542 aaKnown RBP18.37■□□□□ 0.53
MCF2L-214ENST00000423251 PATE1Q8WXA2 126 aa18.37■□□□□ 0.53
MCF2L-214ENST00000423251 CFAP36Q96G28 342 aa18.37■□□□□ 0.53
MCF2L-214ENST00000423251 FAM167BQ9BTA0 163 aa18.37■□□□□ 0.53
MCF2L-214ENST00000423251 TSSK1BQ9BXA7 367 aa18.37■□□□□ 0.53
MCF2L-214ENST00000423251 P2RY12Q9H244 342 aa18.37■□□□□ 0.53
MCF2L-214ENST00000423251 PLAC1Q9HBJ0 212 aa18.37■□□□□ 0.53
MCF2L-214ENST00000423251 SARS2Q9NP81 518 aaKnown RBP18.37■□□□□ 0.53
MCF2L-214ENST00000423251 ZDHHC18Q9NUE0 388 aa18.37■□□□□ 0.53
MCF2L-214ENST00000423251 LRIT1Q9P2V4 623 aa18.37■□□□□ 0.53
MCF2L-214ENST00000423251 LOC400499M0QZD8 3231 aa18.36■□□□□ 0.53
MCF2L-214ENST00000423251 TRBV23OR9-2A0A075B6M9 112 aa18.36■□□□□ 0.53
MCF2L-214ENST00000423251 BRAFP15056 766 aa18.36■□□□□ 0.53
MCF2L-214ENST00000423251 RPL10P27635 214 aaKnown RBP18.36■□□□□ 0.53
MCF2L-214ENST00000423251 CYP4F3Q08477 520 aa18.36■□□□□ 0.53
MCF2L-214ENST00000423251 RPA4Q13156 261 aa18.36■□□□□ 0.53
MCF2L-214ENST00000423251 FASTKD3Q14CZ7 662 aaKnown RBP18.36■□□□□ 0.53
MCF2L-214ENST00000423251 XKR5Q6UX68 686 aa18.36■□□□□ 0.53
MCF2L-214ENST00000423251 ZNF438Q7Z4V0 828 aa18.36■□□□□ 0.53
MCF2L-214ENST00000423251 SLC9B2Q86UD5 537 aa18.36■□□□□ 0.53
MCF2L-214ENST00000423251 UNC5BQ8IZJ1 945 aa18.36■□□□□ 0.53
MCF2L-214ENST00000423251 SLC37A2Q8TED4 501 aa18.36■□□□□ 0.53
MCF2L-214ENST00000423251 LPGAT1Q92604 370 aa18.36■□□□□ 0.53
MCF2L-214ENST00000423251 CERS2Q96G23 380 aa18.36■□□□□ 0.53
MCF2L-214ENST00000423251 SAYSD1Q9NPB0 183 aa18.36■□□□□ 0.53
MCF2L-214ENST00000423251 SCHIP1Q9P0W5 487 aaPredicted RBP18.36■□□□□ 0.53
MCF2L-214ENST00000423251 GNPTGQ9UJJ9 305 aa18.36■□□□□ 0.53
MCF2L-214ENST00000423251 FBXO5Q9UKT4 447 aa18.36■□□□□ 0.53
MCF2L-214ENST00000423251 PCDHB1Q9Y5F3 818 aa18.36■□□□□ 0.53
MCF2L-214ENST00000423251 RNF215Q9Y6U7 377 aa18.36■□□□□ 0.53
MCF2L-214ENST00000423251 TRABD2BA6NFA1 517 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 RHPN2P1A8MT19 583 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 LIN7AO14910 233 aaPredicted RBP18.35■□□□□ 0.53
MCF2L-214ENST00000423251 ESR1P03372 595 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 ERVK-10P10266 1014 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 HALP42357 657 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 GPR3P46089 330 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 PLOD1Q02809 727 aaPredicted RBP18.35■□□□□ 0.53
MCF2L-214ENST00000423251 CTBP1Q13363 440 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 BIRC2Q13490 618 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 CAMK2BQ13554 666 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 NR1D2Q14995 579 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 CLCA4Q14CN2 919 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 SMAD1Q15797 465 aaKnown RBP18.35■□□□□ 0.53
MCF2L-214ENST00000423251 SEPT7Q16181 437 aaKnown RBP18.35■□□□□ 0.53
MCF2L-214ENST00000423251 PERM1Q5SV97 790 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 CHCHD2P9Q5T1J5 151 aaPredicted RBP18.35■□□□□ 0.53
MCF2L-214ENST00000423251 PTRHD1Q6GMV3 140 aaKnown RBP18.35■□□□□ 0.53
MCF2L-214ENST00000423251 ZNF449Q6P9G9 518 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 DENND6AQ8IWF6 608 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 CNTN4Q8IWV2 1026 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 PALM2Q8IXS6 379 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 CCDC74AQ96AQ1 378 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 SH3KBP1Q96B97 665 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 BIRC8Q96P09 236 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 ABCG4Q9H172 646 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 COG4Q9H9E3 785 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 IARS2Q9NSE4 1012 aaKnown RBP18.35■□□□□ 0.53
MCF2L-214ENST00000423251 MOCS1Q9NZB8 636 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 ZNF624Q9P2J8 865 aaPredicted RBP18.35■□□□□ 0.53
MCF2L-214ENST00000423251 CPNE7Q9UBL6 633 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 WDR37Q9Y2I8 494 aa18.35■□□□□ 0.53
MCF2L-214ENST00000423251 FASNP49327 2511 aaKnown RBP18.34■□□□□ 0.53
MCF2L-214ENST00000423251 URB1O60287 2271 aaKnown RBP18.34■□□□□ 0.53
MCF2L-214ENST00000423251 PIKFYVEQ9Y2I7 2098 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 UBA6A0AVT1 1052 aaPredicted RBP18.34■□□□□ 0.53
MCF2L-214ENST00000423251 H3BMM5 538 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 PPM1DO15297 605 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 ZW10O43264 779 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 OPA1O60313 960 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 FMO4P31512 558 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 SLC19A1P41440 591 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 SLC1A2P43004 574 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 EIF3BP55884 814 aaKnown RBP18.34■□□□□ 0.53
MCF2L-214ENST00000423251 CLDN6P56747 220 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 UBE2IP63279 158 aaKnown RBP18.34■□□□□ 0.53
MCF2L-214ENST00000423251 HHEXQ03014 270 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 CAPRIN2Q6IMN6 1127 aaKnown RBP18.34■□□□□ 0.53
MCF2L-214ENST00000423251 KIAA0408Q6ZU52 694 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 CEP128Q6ZU80 1094 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 CYS1Q717R9 158 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 C2CD4AQ8NCU7 369 aaPredicted RBP18.34■□□□□ 0.53
MCF2L-214ENST00000423251 WDR48Q8TAF3 677 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 GSDMBQ8TAX9 411 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 ELMO1Q92556 727 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 PANX3Q96QZ0 392 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 CCDC3Q9BQI4 270 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 TSPYL1Q9H0U9 437 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 STN1Q9H668 368 aaKnown RBP18.34■□□□□ 0.53
MCF2L-214ENST00000423251 DKK4Q9UBT3 224 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 MTRF1LQ9UGC7 380 aaKnown RBP18.34■□□□□ 0.53
MCF2L-214ENST00000423251 CRYL1Q9Y2S2 319 aa18.34■□□□□ 0.53
MCF2L-214ENST00000423251 ASXL3Q9C0F0 2248 aa18.33■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms