RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 TARDBPQ13148 414 aaKnown RBP eCLIP15.43■□□□□ 0.06
BRAT1-202ENST00000421712 TRADDQ15628 312 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 RPE65Q16518 533 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 NAPRTQ6XQN6 538 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 UNC5AQ6ZN44 842 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 RBM44Q6ZP01 1051 aaKnown RBP15.43■□□□□ 0.06
BRAT1-202ENST00000421712 USP53Q70EK8 1073 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 CCDC25Q86WR0 208 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 LRRC6Q86X45 466 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 DENND6AQ8IWF6 608 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 PALM2Q8IXS6 379 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 UNC5BQ8IZJ1 945 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 KRT222Q8N1A0 295 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 FBXO36Q8NEA4 188 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 PYROXD1Q8WU10 500 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 ART4Q93070 314 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 DEPDC7Q96QD5 511 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 PANX3Q96QZ0 392 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 CCDC68Q9H2F9 335 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 SAYSD1Q9NPB0 183 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 FBXO6Q9NRD1 293 aaPredicted RBP15.43■□□□□ 0.06
BRAT1-202ENST00000421712 ATXN7L1Q9ULK2 861 aaPredicted RBP15.43■□□□□ 0.06
BRAT1-202ENST00000421712 TEX264Q9Y6I9 313 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 KNTC1P50748 2209 aa15.43■□□□□ 0.06
BRAT1-202ENST00000421712 PRR19A6NJB7 356 aa15.42■□□□□ 0.06
BRAT1-202ENST00000421712 LIN7AO14910 233 aaPredicted RBP15.42■□□□□ 0.06
BRAT1-202ENST00000421712 CASC3O15234 703 aaKnown RBP15.42■□□□□ 0.06
BRAT1-202ENST00000421712 UBE2IP63279 158 aaKnown RBP15.42■□□□□ 0.06
BRAT1-202ENST00000421712 TYSND1Q2T9J0 566 aa15.42■□□□□ 0.06
BRAT1-202ENST00000421712 MAP9Q49MG5 647 aa15.42■□□□□ 0.06
BRAT1-202ENST00000421712 GLE1Q53GS7 698 aaKnown RBP15.42■□□□□ 0.06
BRAT1-202ENST00000421712 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.42■□□□□ 0.06
BRAT1-202ENST00000421712 NKAIN2Q5VXU1 208 aa15.42■□□□□ 0.06
BRAT1-202ENST00000421712 CAPN12Q6ZSI9 719 aa15.42■□□□□ 0.06
BRAT1-202ENST00000421712 ZNF438Q7Z4V0 828 aa15.42■□□□□ 0.06
BRAT1-202ENST00000421712 LMNTD2Q8IXW0 634 aa15.42■□□□□ 0.06
BRAT1-202ENST00000421712 SPDYE1Q8NFV5 336 aaPredicted RBP15.42■□□□□ 0.06
BRAT1-202ENST00000421712 OR10G6Q8NH81 332 aa15.42■□□□□ 0.06
BRAT1-202ENST00000421712 GSDMBQ8TAX9 411 aa15.42■□□□□ 0.06
BRAT1-202ENST00000421712 FBXO25Q8TCJ0 367 aa15.42■□□□□ 0.06
BRAT1-202ENST00000421712 TMEM159Q96B96 161 aa15.42■□□□□ 0.06
BRAT1-202ENST00000421712 INSM2Q96T92 566 aaPredicted RBP15.42■□□□□ 0.06
BRAT1-202ENST00000421712 POT1Q9NUX5 634 aa15.42■□□□□ 0.06
BRAT1-202ENST00000421712 INTS10Q9NVR2 710 aaKnown RBP15.42■□□□□ 0.06
BRAT1-202ENST00000421712 FBXO5Q9UKT4 447 aa15.42■□□□□ 0.06
BRAT1-202ENST00000421712 PCDHB1Q9Y5F3 818 aa15.42■□□□□ 0.06
BRAT1-202ENST00000421712 SPEGQ15772 3267 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 PRAMEF33A0A0G2JMD5 474 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 A0A1W2PQM1 296 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 E5RI56 91 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 EIF3HO15372 352 aaKnown RBP eCLIP15.41■□□□□ 0.06
BRAT1-202ENST00000421712 CSO75390 466 aaKnown RBP15.41■□□□□ 0.06
BRAT1-202ENST00000421712 TCEA3O75764 348 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 S1PR4O95977 384 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 ESR1P03372 595 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 APOA4P06727 396 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 F7P08709 466 aaPredicted RBP15.41■□□□□ 0.06
BRAT1-202ENST00000421712 MTHFD1P11586 935 aaKnown RBP15.41■□□□□ 0.06
BRAT1-202ENST00000421712 AMD1P17707 334 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 CHRM3P20309 590 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 RPS3P23396 243 aaKnown RBP eCLIP15.41■□□□□ 0.06
BRAT1-202ENST00000421712 PDHA2P29803 388 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 CCR7P32248 378 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 SLC1A2P43004 574 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 CARSP49589 748 aaKnown RBP15.41■□□□□ 0.06
BRAT1-202ENST00000421712 HSPA14Q0VDF9 509 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 RPA4Q13156 261 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 FASTKD3Q14CZ7 662 aaKnown RBP15.41■□□□□ 0.06
BRAT1-202ENST00000421712 TMED2Q15363 201 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 CDCP2Q5VXM1 449 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 TMEM26Q6ZUK4 368 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 PIM3Q86V86 326 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 IFT81Q8WYA0 676 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 LPGAT1Q92604 370 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 CERS2Q96G23 380 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 FERD3LQ96RJ6 166 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 TBC1D10AQ9BXI6 508 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 P2RY12Q9H244 342 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 RDH14Q9HBH5 336 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 SLC40A1Q9NP59 571 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 FAM114A2Q9NRY5 505 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 NEUROG3Q9Y4Z2 214 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 HEBP2Q9Y5Z4 205 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 COLEC10Q9Y6Z7 277 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 PTPRBP23467 1997 aa15.41■□□□□ 0.06
BRAT1-202ENST00000421712 IGHV1OR21-1A0A087WYE8 117 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 E7ESA3 106 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 H3BMM5 538 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 NTN3O00634 580 aaPredicted RBP15.4■□□□□ 0.06
BRAT1-202ENST00000421712 KPNA5O15131 536 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 DUX1O43812 170 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 PKMP14618 531 aaKnown RBP15.4■□□□□ 0.06
BRAT1-202ENST00000421712 TYRP1P17643 537 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 GPLD1P80108 840 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 SHC2P98077 582 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 MPP1Q00013 466 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 PLOD1Q02809 727 aaPredicted RBP15.4■□□□□ 0.06
BRAT1-202ENST00000421712 NR1D2Q14995 579 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 PLCL1Q15111 1095 aa15.4■□□□□ 0.06
BRAT1-202ENST00000421712 ZNF789Q5FWF6 425 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms