RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 SLC10A3P09131 477 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SELPP16109 830 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 VARSP26640 1264 aaKnown RBP11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 GALK1P51570 392 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PWP1Q13610 501 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 C16orf72Q14CZ0 275 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 C5orf22Q49AR2 442 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CCSAPQ6IQ19 270 aaPredicted RBP11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 RETSATQ6NUM9 610 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SLC13A3Q8WWT9 602 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 C12orf43Q96C57 262 aaKnown RBP11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ASIC4Q96FT7 647 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 MYO19Q96H55 970 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TBCDQ9BTW9 1192 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ZFYVE1Q9HBF4 777 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PREBQ9HCU5 417 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HCSTQ9UBK5 93 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 USP22Q9UPT9 525 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ASPDHA6ND91 283 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 C16orf96A6NNT2 1141 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ALPIP09923 528 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CD9P21926 228 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 IL12AP29459 219 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 MTHFRP42898 656 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 NKX3-2P78367 333 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 BCL2L1Q07817 233 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 KCTD8Q6ZWB6 473 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CROCCP3Q8IVE0 287 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 LZICQ8WZA0 190 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TTLL2Q9BWV7 592 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SEZ6LQ9BYH1 1024 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HEBP1Q9NRV9 189 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 AFF4Q9UHB7 1163 aaKnown RBP11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PHF24Q9UPV7 400 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 BPTFQ12830 3046 aa11.52□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 GRXCR2A6NFK2 248 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 BNIP3LO60238 219 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 KLKB1P03952 638 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 GALTP07902 379 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 EPB42P16452 691 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HMGCLP35914 325 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SMAD3P84022 425 aaKnown RBP11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 BFSP2Q13515 415 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ABRAXAS2Q15018 415 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 C18orf21Q32NC0 220 aaPredicted RBP11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 FAM174BQ3ZCQ3 159 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 RFTN2Q52LD8 501 aaPredicted RBP11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 DPP10Q8N608 796 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CLDN19Q8N6F1 224 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 GAB3Q8WWW8 586 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 MARCH5Q9NX47 278 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 RHBDL2Q9NX52 303 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 IL17CQ9P0M4 197 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 WARS2Q9UGM6 360 aaKnown RBP11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 EBF1Q9UH73 591 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ADGRE2Q9UHX3 823 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 BLOC1S6Q9UL45 172 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CDC14AQ9UNH5 594 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 INVSQ9Y283 1065 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SLC28A1O00337 649 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 THRBP10828 461 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 MSH3P20585 1137 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 GNPDA1P46926 289 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 YAP1P46937 504 aaKnown RBP11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 SGSHP51688 502 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ARSFP54793 590 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ARF5P84085 180 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PCBP2Q15366 365 aaKnown RBP eCLIP11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TTC23Q5W5X9 447 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 NCEH1Q6PIU2 408 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 DTWD1Q8N5C7 304 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 DRAXINQ8NBI3 349 aaPredicted RBP11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 OR10A6Q8NH74 314 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 YTHDF1Q9BYJ9 559 aaKnown RBP11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 OSBPL6Q9BZF3 934 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 HIPK3Q9H422 1215 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ELAC1Q9H777 363 aaKnown RBP11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 ACTR8Q9H981 624 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PARVBQ9HBI1 364 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PTPRDP23468 1912 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 DOCK4Q8N1I0 1966 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 G3V2T6 193 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PRRG1O14668 218 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CST1P01037 141 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 DAG1Q14118 895 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PTGR1Q14914 329 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CYBRD1Q53TN4 286 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 INO80DQ53TQ3 878 aaPredicted RBP11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 NPAS4Q8IUM7 802 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 C8orf59Q8N0T1 100 aaPredicted RBP11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TTC30BQ8N4P2 665 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PNPT1Q8TCS8 783 aaKnown RBP11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 RAET1EQ8TD07 263 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 TMBIM1Q969X1 311 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 C2orf49Q9BVC5 232 aaPredicted RBP11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 PLGRKTQ9HBL7 147 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 IFT80Q9P2H3 777 aaPredicted RBP11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CIDEBQ9UHD4 219 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 CROCCQ5TZA2 2017 aa11.51□□□□□ -0.57
CSPG4P3Y-201ENST00000418188 FNDC1Q4ZHG4 1894 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms