RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 NPWQ8N729 165 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 FLAD1Q8NFF5 587 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 FAM151AQ8WW52 585 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 ITCHQ96J02 903 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 SIGLEC11Q96RL6 698 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 SYTL2Q9HCH5 934 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 TRMT13Q9NUP7 481 aaKnown RBP7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 RABL2AQ9UBK7 228 aaPredicted RBP7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 TBC1D24Q9ULP9 559 aa7.92□□□□□ -1.14
HMGXB4-202ENST00000418170 LOC110117498-PIK3R3F6TDL0 507 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 hCG_2039718K7EN88 272 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 ITGA2P17301 1181 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 LIPAP38571 399 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 RPL34P49207 117 aaKnown RBP7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 CLCN5P51795 746 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 AP2S1P53680 142 aaPredicted RBP7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 ZNF789Q5FWF6 425 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 SPANXN2Q5MJ10 180 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 KIAA0930Q6ICG6 404 aaPredicted RBP7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 ADHFE1Q8IWW8 467 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 DEFB106AQ8N104 65 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 NLGN1Q8N2Q7 840 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 FBXO30Q8TB52 745 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 SETD6Q8TBK2 473 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 SLC47A1Q96FL8 570 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 CCDC32Q9BV29 185 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 B3GNT4Q9C0J1 378 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 FZD8Q9H461 694 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 TREX1Q9NSU2 369 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 AASSQ9UDR5 926 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 COL1A2P08123 1366 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 FAM234BA2RU67 622 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 C12orf71A8MTZ7 269 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 WISP3O95389 354 aaPredicted RBP7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 STAG3L1P0CL83 205 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 PAMP19021 973 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 MAGEA11P43364 429 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 PPP3CCP48454 512 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 MTPNP58546 118 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 PITX1P78337 314 aaPredicted RBP7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 PPP1R8Q12972 351 aaKnown RBP7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 KEAP1Q14145 624 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 GBX1Q14549 363 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 IL31Q6EBC2 164 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 DLEU7Q6UYE1 221 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 RAB43Q86YS6 212 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 CCDC117Q8IWD4 279 aaPredicted RBP7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 TMCO6Q96DC7 493 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 ZBED3Q96IU2 234 aaPredicted RBP7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 OR2A14Q96R47 310 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 PCYT2Q99447 389 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 ASB7Q9H672 318 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 ACTR8Q9H981 624 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 UTS2RQ9UKP6 389 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 RNF6Q9Y252 685 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 TNFSF13BQ9Y275 285 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 NME7Q9Y5B8 376 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 A0A1W2PQ72 361 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 FAM72CH0Y354 149 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 SLC4A1P02730 911 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 IL7P13232 177 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 CTRB1P17538 263 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 ITGB6P18564 788 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 SLC26A3P40879 764 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 CTSKP43235 329 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 PRIM2P49643 509 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 HUNKP57058 714 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 RBP5P82980 135 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 SYT16Q17RD7 645 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 FAM72AQ5TYM5 149 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 CTRB2Q6GPI1 263 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 CCSAPQ6IQ19 270 aaPredicted RBP7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 DENND5AQ6IQ26 1287 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 FAM72DQ6L9T8 149 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 BNIPLQ7Z465 357 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 FAM72BQ86X60 149 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 DPF3Q92784 378 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 PPM1MQ96MI6 270 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 TBL1YQ9BQ87 522 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 MRPL45Q9BRJ2 306 aaKnown RBP7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 FBXO9Q9UK97 447 aaPredicted RBP7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 AGO1Q9UL18 857 aaKnown RBP7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 ERVW-1Q9UQF0 538 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 LYVE1Q9Y5Y7 322 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 SCN1AP35498 2009 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 TSC2P49815 1807 aa7.91□□□□□ -1.14
HMGXB4-202ENST00000418170 INO80B-WBP1J3KQ70 363 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 ARHGAP33O14559 1287 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 CACNG3O60359 315 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 SIX3O95343 332 aaPredicted RBP7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 JCHAINP01591 159 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 NAGAP17050 411 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 GADD45AP24522 165 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 INTS6LQ5JSJ4 861 aaKnown RBP7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 HECTD2Q5U5R9 776 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 ARHGAP17Q68EM7 881 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 SYCE2Q6PIF2 218 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 TMEM207Q6UWW9 146 aa7.9□□□□□ -1.14
HMGXB4-202ENST00000418170 ARHGAP36Q6ZRI8 547 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms