RNA–Protein interactions for RNA: ENST00000414879.5

PTPRF-205, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 4,836 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-205ENST00000414879 KCNJ13O60928 360 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 CCNYL3P0C7X3 344 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 DUX4L2P0CJ85 424 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 DUX4L3P0CJ86 424 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 DUX4L4P0CJ87 422 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 DUX4L5P0CJ88 424 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 DUX4L6P0CJ89 424 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 DUX4L7P0CJ90 424 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 NRIP1P48552 1158 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 PSMD4P55036 377 aaKnown RBP11.8□□□□□ -0.52
PTPRF-205ENST00000414879 LARS2Q15031 903 aaKnown RBP11.8□□□□□ -0.52
PTPRF-205ENST00000414879 C9orf64Q5T6V5 341 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 TXNRD3NBQ6F5E7 133 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 ABRAXAS1Q6UWZ7 409 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 KBTBD7Q8WVZ9 684 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 SMPDL3AQ92484 453 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 SEC14L1Q92503 715 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 GPR62Q9BZJ7 368 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 RIBC2Q9H4K1 309 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 DUX4Q9UBX2 424 aa11.8□□□□□ -0.52
PTPRF-205ENST00000414879 AGR2O95994 175 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 CSF2RAP15509 400 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 HRH2P25021 359 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 SLC14A2Q15849 920 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 PLEKHG4Q58EX7 1191 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 TRMT10BQ6PF06 316 aaKnown RBP11.79□□□□□ -0.52
PTPRF-205ENST00000414879 GRASPQ7Z6J2 395 aaPredicted RBP11.79□□□□□ -0.52
PTPRF-205ENST00000414879 BTBD1Q9H0C5 482 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 C8orf33Q9H7E9 229 aaPredicted RBP11.79□□□□□ -0.52
PTPRF-205ENST00000414879 CD248Q9HCU0 757 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 HPS4Q9NQG7 708 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 IFT80Q9P2H3 777 aaPredicted RBP11.79□□□□□ -0.52
PTPRF-205ENST00000414879 ATP6AP2A0A1C7CYW4 349 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 FAM234BA2RU67 622 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 J3KR12 359 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 ATP6AP2O75787 350 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 RHOP08100 348 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 CDH3P22223 829 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 FGFR3P22607 806 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 ACVRL1P37023 503 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 WASP42768 502 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 CCR8P51685 355 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 C2orf80Q0P641 193 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 STX4Q12846 297 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 GCNT6Q5T4J0 391 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 OFCC1Q8IZS5 231 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 CMTM8Q8IZV2 173 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 RNF148Q8N7C7 305 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 SIDT2Q8NBJ9 832 aaKnown RBP11.79□□□□□ -0.52
PTPRF-205ENST00000414879 TRPV1Q8NER1 839 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 BTN2A2Q8WVV5 523 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 CENPIQ92674 756 aaPredicted RBP11.79□□□□□ -0.52
PTPRF-205ENST00000414879 SIGLEC10Q96LC7 697 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 CERS4Q9HA82 394 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 ARL5AQ9Y689 179 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 LAMB1P07942 1786 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 BHMG1C9JSJ3 638 aaPredicted RBP11.79□□□□□ -0.52
PTPRF-205ENST00000414879 E7ESA3 106 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 TSPAN6O43657 245 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 PRMT3O60678 531 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 TNFP01375 233 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 CAPN1P07384 714 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 ANPEPP15144 967 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 TCF3P15923 654 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 CCNA2P20248 432 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 PRPS1L1P21108 318 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 MRPL28Q13084 256 aaKnown RBP11.79□□□□□ -0.52
PTPRF-205ENST00000414879 SPIN4Q56A73 249 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 ALYREFQ86V81 257 aaKnown RBP11.79□□□□□ -0.52
PTPRF-205ENST00000414879 SFRP1Q8N474 314 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 WDTC1Q8N5D0 677 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 C2CD4AQ8NCU7 369 aaPredicted RBP11.79□□□□□ -0.52
PTPRF-205ENST00000414879 METTL21AQ8WXB1 218 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 HIC2Q96JB3 615 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 ADI1Q9BV57 179 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.79□□□□□ -0.52
PTPRF-205ENST00000414879 MYH8P13535 1937 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 ELOVL7A1L3X0 281 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 EIF3FO00303 357 aaPredicted RBP11.79□□□□□ -0.52
PTPRF-205ENST00000414879 GSC2O15499 205 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 NDUFB5O43674 189 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 ZNF24P17028 368 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 LYSMD3Q7Z3D4 306 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 HM13Q8TCT9 377 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 AUTS2Q8WXX7 1259 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 ZBED6CLQ96FA7 236 aaPredicted RBP11.79□□□□□ -0.52
PTPRF-205ENST00000414879 PEBP4Q96S96 227 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 MKS1Q9NXB0 559 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 ACSL5Q9ULC5 683 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 GSTK1Q9Y2Q3 226 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 A0A1B0GUL6 1792 aa11.79□□□□□ -0.52
PTPRF-205ENST00000414879 BRWD3Q6RI45 1802 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 AGPSO00116 658 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 SLC28A2O43868 658 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 UBXN7O94888 489 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 PGLSO95336 258 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 CST1P01037 141 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 TSPAN8P19075 237 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 GSTM5P46439 218 aa11.78□□□□□ -0.52
PTPRF-205ENST00000414879 AVPR1BP47901 424 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms