RNA–Protein interactions for RNA: ENST00000407583.7

GPN1-202, Transcript of GPN-loop GTPase 1, humanhuman

TSL 1 (best) BASIC

Gene GPN1, Length 1,395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-202ENST00000407583 TM9SF3Q9HD45 589 aa8.79□□□□□ -1
GPN1-202ENST00000407583 ARMC1Q9NVT9 282 aa8.79□□□□□ -1
GPN1-202ENST00000407583 FZD10Q9ULW2 581 aa8.79□□□□□ -1
GPN1-202ENST00000407583 APCP25054 2843 aa8.78□□□□□ -1
GPN1-202ENST00000407583 MED13Q9UHV7 2174 aa8.78□□□□□ -1
GPN1-202ENST00000407583 LOC100653049A0A140TA62 436 aa8.78□□□□□ -1
GPN1-202ENST00000407583 A0A1W2PNU3 283 aaPredicted RBP8.78□□□□□ -1
GPN1-202ENST00000407583 TCRBV3S1A0A5B6 114 aa8.78□□□□□ -1
GPN1-202ENST00000407583 SH3PXD2BA1X283 911 aa8.78□□□□□ -1
GPN1-202ENST00000407583 TYW5A2RUC4 315 aaKnown RBP8.78□□□□□ -1
GPN1-202ENST00000407583 OR6C75A6NL08 312 aa8.78□□□□□ -1
GPN1-202ENST00000407583 H3BNH8 94 aa8.78□□□□□ -1
GPN1-202ENST00000407583 SCAMP3O14828 347 aaKnown RBP8.78□□□□□ -1
GPN1-202ENST00000407583 AIM2O14862 343 aa8.78□□□□□ -1
GPN1-202ENST00000407583 HNRNPRO43390 633 aaKnown RBP8.78□□□□□ -1
GPN1-202ENST00000407583 KRT34O76011 436 aa8.78□□□□□ -1
GPN1-202ENST00000407583 VAPBO95292 243 aa8.78□□□□□ -1
GPN1-202ENST00000407583 PGM3O95394 542 aa8.78□□□□□ -1
GPN1-202ENST00000407583 ESRRBO95718 433 aa8.78□□□□□ -1
GPN1-202ENST00000407583 C2P06681 752 aa8.78□□□□□ -1
GPN1-202ENST00000407583 BMP2P12643 396 aa8.78□□□□□ -1
GPN1-202ENST00000407583 TFEBP19484 476 aa8.78□□□□□ -1
GPN1-202ENST00000407583 HMOX2P30519 316 aa8.78□□□□□ -1
GPN1-202ENST00000407583 GRIA4P48058 902 aa8.78□□□□□ -1
GPN1-202ENST00000407583 THOP1P52888 689 aa8.78□□□□□ -1
GPN1-202ENST00000407583 CDH8P55286 799 aa8.78□□□□□ -1
GPN1-202ENST00000407583 SESN2P58004 480 aaPredicted RBP8.78□□□□□ -1
GPN1-202ENST00000407583 USP46P62068 366 aa8.78□□□□□ -1
GPN1-202ENST00000407583 MRPS22P82650 360 aaKnown RBP8.78□□□□□ -1
GPN1-202ENST00000407583 TMED1Q13445 227 aa8.78□□□□□ -1
GPN1-202ENST00000407583 INPP5AQ14642 412 aa8.78□□□□□ -1
GPN1-202ENST00000407583 DHCR24Q15392 516 aa8.78□□□□□ -1
GPN1-202ENST00000407583 SHBQ15464 509 aa8.78□□□□□ -1
GPN1-202ENST00000407583 TEAD4Q15561 434 aa8.78□□□□□ -1
GPN1-202ENST00000407583 SLC10A6Q3KNW5 377 aa8.78□□□□□ -1
GPN1-202ENST00000407583 LSM12Q3MHD2 195 aaKnown RBP8.78□□□□□ -1
GPN1-202ENST00000407583 SLC9B1Q4ZJI4 515 aa8.78□□□□□ -1
GPN1-202ENST00000407583 EGFLAMQ63HQ2 1017 aa8.78□□□□□ -1
GPN1-202ENST00000407583 CHSY3Q70JA7 882 aa8.78□□□□□ -1
GPN1-202ENST00000407583 DPH6Q7L8W6 267 aa8.78□□□□□ -1
GPN1-202ENST00000407583 BNIPLQ7Z465 357 aa8.78□□□□□ -1
GPN1-202ENST00000407583 KCNMB4Q86W47 210 aa8.78□□□□□ -1
GPN1-202ENST00000407583 CAMK1DQ8IU85 385 aa8.78□□□□□ -1
GPN1-202ENST00000407583 SLC22A9Q8IVM8 553 aa8.78□□□□□ -1
GPN1-202ENST00000407583 MMP21Q8N119 569 aa8.78□□□□□ -1
GPN1-202ENST00000407583 BBS5Q8N3I7 341 aa8.78□□□□□ -1
GPN1-202ENST00000407583 TMEM102Q8N9M5 508 aaPredicted RBP8.78□□□□□ -1
GPN1-202ENST00000407583 UBA3Q8TBC4 463 aa8.78□□□□□ -1
GPN1-202ENST00000407583 FNDC8Q8TC99 324 aa8.78□□□□□ -1
GPN1-202ENST00000407583 SAP25Q8TEE9 199 aa8.78□□□□□ -1
GPN1-202ENST00000407583 RNF139Q8WU17 664 aa8.78□□□□□ -1
GPN1-202ENST00000407583 TSPEARQ8WU66 669 aa8.78□□□□□ -1
GPN1-202ENST00000407583 NT5C3BQ969T7 300 aa8.78□□□□□ -1
GPN1-202ENST00000407583 C18orf25Q96B23 403 aaPredicted RBP8.78□□□□□ -1
GPN1-202ENST00000407583 ZNF669Q96BR6 464 aaPredicted RBP8.78□□□□□ -1
GPN1-202ENST00000407583 HDAC11Q96DB2 347 aa8.78□□□□□ -1
GPN1-202ENST00000407583 CCDC97Q96F63 343 aaPredicted RBP8.78□□□□□ -1
GPN1-202ENST00000407583 TSPAN17Q96FV3 270 aa8.78□□□□□ -1
GPN1-202ENST00000407583 VPS39Q96JC1 886 aa8.78□□□□□ -1
GPN1-202ENST00000407583 CNBD2Q96M20 576 aa8.78□□□□□ -1
GPN1-202ENST00000407583 HOPXQ9BPY8 73 aaPredicted RBP8.78□□□□□ -1
GPN1-202ENST00000407583 MRPL57Q9BQC6 102 aaKnown RBP8.78□□□□□ -1
GPN1-202ENST00000407583 GATA5Q9BWX5 397 aaPredicted RBP8.78□□□□□ -1
GPN1-202ENST00000407583 GRIP2Q9C0E4 1043 aa8.78□□□□□ -1
GPN1-202ENST00000407583 GBA3Q9H227 469 aa8.78□□□□□ -1
GPN1-202ENST00000407583 MRPL46Q9H2W6 279 aaKnown RBP8.78□□□□□ -1
GPN1-202ENST00000407583 ZNF395Q9H8N7 513 aaPredicted RBP8.78□□□□□ -1
GPN1-202ENST00000407583 TBC1D23Q9NUY8 699 aa8.78□□□□□ -1
GPN1-202ENST00000407583 SYBUQ9NX95 663 aa8.78□□□□□ -1
GPN1-202ENST00000407583 USP36Q9P275 1121 aaKnown RBP8.78□□□□□ -1
GPN1-202ENST00000407583 FAF1Q9UNN5 650 aaPredicted RBP8.78□□□□□ -1
GPN1-202ENST00000407583 ACOT9Q9Y305 439 aa8.78□□□□□ -1
GPN1-202ENST00000407583 AAR2Q9Y312 384 aaKnown RBP8.78□□□□□ -1
GPN1-202ENST00000407583 CEPT1Q9Y6K0 416 aa8.78□□□□□ -1
GPN1-202ENST00000407583 ZNF638Q14966 1978 aaKnown RBP8.78□□□□□ -1
GPN1-202ENST00000407583 TBC1D3BA6NDS4 549 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 TRIM64A6NGJ6 449 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 XPO1O14980 1071 aaKnown RBP8.77□□□□□ -1.01
GPN1-202ENST00000407583 SNAP91O60641 907 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 NOL3O60936 208 aaKnown RBP8.77□□□□□ -1.01
GPN1-202ENST00000407583 CLDN1O95832 211 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 F9P00740 461 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 USP17L7P0C7H9 530 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 ETS2P15036 469 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 ZNF26P17031 533 aaPredicted RBP8.77□□□□□ -1.01
GPN1-202ENST00000407583 CKMT2P17540 419 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 ATP5F1P24539 256 aaPredicted RBP8.77□□□□□ -1.01
GPN1-202ENST00000407583 CD97P48960 835 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 PSME3P61289 254 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 ZXDBP98169 803 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 MPP1Q00013 466 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 NSUN2Q08J23 767 aaKnown RBP eCLIP8.77□□□□□ -1.01
GPN1-202ENST00000407583 SLC10A2Q12908 348 aaPredicted RBP8.77□□□□□ -1.01
GPN1-202ENST00000407583 MTM1Q13496 603 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 CA9Q16790 459 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 MYLK3Q32MK0 819 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 ZBED5Q49AG3 693 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 C3orf38Q5JPI3 329 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 FHL5Q5TD97 284 aa8.77□□□□□ -1.01
GPN1-202ENST00000407583 KCTD11Q693B1 232 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms