RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 TSPAN14Q8NG11 270 aa14.07□□□□□ -0.16
PCDHA11-201ENST00000398640 BHLHE41Q9C0J9 482 aaPredicted RBP14.07□□□□□ -0.16
PCDHA11-201ENST00000398640 NOL11Q9H8H0 719 aaKnown RBP14.07□□□□□ -0.16
PCDHA11-201ENST00000398640 LRTM1Q9HBL6 345 aa14.07□□□□□ -0.16
PCDHA11-201ENST00000398640 HMG20AQ9NP66 347 aa14.07□□□□□ -0.16
PCDHA11-201ENST00000398640 CCDC177Q9NQR7 707 aaPredicted RBP14.07□□□□□ -0.16
PCDHA11-201ENST00000398640 CA14Q9ULX7 337 aa14.07□□□□□ -0.16
PCDHA11-201ENST00000398640 C15orf41Q9Y2V0 281 aa14.07□□□□□ -0.16
PCDHA11-201ENST00000398640 PGM3O95394 542 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 FAM163BP0C2L3 166 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 RYKP34925 604 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 HSPA7P48741 367 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 PDX1P52945 283 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 GPR17Q13304 367 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 PERM1Q5SV97 790 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 FAM182AQ5T1J6 154 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 PSMA8Q8TAA3 256 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 SIPA1Q96FS4 1042 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 CRNNQ9UBG3 495 aaPredicted RBP14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 CCDC88AQ3V6T2 1871 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 UBE2QL1A1L167 161 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 IRAK2O43187 625 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 SNX3O60493 162 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 TMCC2O75069 709 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 ENTPD5O75356 428 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 BNIP2Q12982 314 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 PDK4Q16654 411 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 COLEC12Q5KU26 742 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 WDR45BQ5MNZ6 344 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 IRF2BP2Q7Z5L9 587 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 RBM18Q96H35 190 aaKnown RBP14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 PLEKHG4BQ96PX9 1271 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 CYP2S1Q96SQ9 504 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 PCDHGC3Q9UN70 934 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 SERPINA6P08185 405 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 ACTR1BP42025 376 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 TAS2R50P59544 299 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 ACTR1AP61163 376 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 GBE1Q04446 702 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 HSPB3Q12988 150 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 LIN54Q6MZP7 749 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 RNF19BQ6ZMZ0 732 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 SLC34A3Q8N130 599 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 ZMIZ2Q8NF64 920 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 HCAR2Q8TDS4 363 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 NUS1Q96E22 293 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 DNAJB4Q9UDY4 337 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 AXIN1O15169 862 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 BIRC5O15392 142 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 PLOD3O60568 738 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 SEC24AO95486 1093 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 S100GP29377 79 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 CASRP41180 1078 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 MADCAM1Q13477 382 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 SCAMP5Q8TAC9 235 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 LMX1AQ8TE12 382 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 PPM1MQ96MI6 270 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 PCYT2Q99447 389 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 ACSS3Q9H6R3 686 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 H7C0S8 307 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 INSIG1O15503 277 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 CD48P09326 243 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 PDK3Q15120 406 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 SGCBQ16585 318 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 CLEC6AQ6EIG7 209 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 GALNT18Q6P9A2 607 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 ZNF662Q6ZS27 426 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 C12orf76Q8N812 135 aaPredicted RBP14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 AGAP11Q8TF27 550 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 TBATAQ96M53 351 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 TBC1D10AQ9BXI6 508 aa14.06□□□□□ -0.16
PCDHA11-201ENST00000398640 CCDC182A6NF36 153 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 ANPEPP15144 967 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 ASPAP45381 313 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 PPM1JQ5JR12 505 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 ATCAYQ86WG3 371 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 TAPBPLQ9BX59 468 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 PRDM8Q9NQV8 689 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 PCDHB1Q9Y5F3 818 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 PCDHGB3Q9Y5G1 929 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 WNT6Q9Y6F9 365 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 CCT3P49368 545 aaKnown RBP14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 PPP2R2BQ00005 443 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 PTCD2Q8WV60 388 aaKnown RBP14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 ART5Q96L15 291 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 TEFMQ96QE5 360 aaKnown RBP14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 RHOJQ9H4E5 214 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 TPST2O60704 377 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 SNUPNO95149 360 aaKnown RBP14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 RHOP08100 348 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 CXorf57Q6NSI4 855 aaKnown RBP14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 SLC26A9Q7LBE3 791 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 SIDT2Q8NBJ9 832 aaKnown RBP14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 ZHX1-C8orf76Q96EF9 292 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 SPATA9Q9BWV2 254 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 SSR3Q9UNL2 185 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 EME2A4GXA9 379 aaPredicted RBP14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 C5orf60A6NFR6 353 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 C9JVG2 144 aa14.05□□□□□ -0.16
PCDHA11-201ENST00000398640 GPR32O75388 356 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms