RNA–Protein interactions for RNA: ENST00000398035.6

COLCA2-201, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,414 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-201ENST00000398035 RRP8O43159 456 aaKnown RBP18.39■□□□□ 0.53
COLCA2-201ENST00000398035 OR1I1O60431 355 aa18.39■□□□□ 0.53
COLCA2-201ENST00000398035 TNFSF15O95150 251 aa18.39■□□□□ 0.53
COLCA2-201ENST00000398035 THRAP10827 490 aa18.39■□□□□ 0.53
COLCA2-201ENST00000398035 HOXB3P14651 431 aaPredicted RBP18.39■□□□□ 0.53
COLCA2-201ENST00000398035 GPR18Q14330 331 aa18.39■□□□□ 0.53
COLCA2-201ENST00000398035 MORF4L2Q15014 288 aa18.39■□□□□ 0.53
COLCA2-201ENST00000398035 DNAJC21Q5F1R6 531 aaKnown RBP18.39■□□□□ 0.53
COLCA2-201ENST00000398035 TMEM164Q5U3C3 297 aa18.39■□□□□ 0.53
COLCA2-201ENST00000398035 TMPRSS9Q7Z410 1059 aa18.39■□□□□ 0.53
COLCA2-201ENST00000398035 SNIP1Q8TAD8 396 aaKnown RBP18.39■□□□□ 0.53
COLCA2-201ENST00000398035 GABPB2Q8TAK5 448 aaPredicted RBP18.39■□□□□ 0.53
COLCA2-201ENST00000398035 NAT14Q8WUY8 206 aa18.39■□□□□ 0.53
COLCA2-201ENST00000398035 ZDHHC12Q96GR4 267 aa18.39■□□□□ 0.53
COLCA2-201ENST00000398035 PANX3Q96QZ0 392 aa18.39■□□□□ 0.53
COLCA2-201ENST00000398035 TBC1D10AQ9BXI6 508 aa18.39■□□□□ 0.53
COLCA2-201ENST00000398035 RAB33BQ9H082 229 aa18.39■□□□□ 0.53
COLCA2-201ENST00000398035 FAM8A1Q9UBU6 413 aa18.39■□□□□ 0.53
COLCA2-201ENST00000398035 EPHA6Q9UF33 1036 aa18.39■□□□□ 0.53
COLCA2-201ENST00000398035 PCDHGA7Q9Y5G6 932 aa18.39■□□□□ 0.53
COLCA2-201ENST00000398035 PRSS21Q9Y6M0 314 aa18.39■□□□□ 0.53
COLCA2-201ENST00000398035 CHD8Q9HCK8 2581 aa18.39■□□□□ 0.53
COLCA2-201ENST00000398035 ASXL3Q9C0F0 2248 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 USP1O94782 785 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 TTC4O95801 387 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 RPS3P23396 243 aaKnown RBP eCLIP18.38■□□□□ 0.53
COLCA2-201ENST00000398035 MAPK9P45984 424 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 ARCN1P48444 511 aaKnown RBP18.38■□□□□ 0.53
COLCA2-201ENST00000398035 ADARP55265 1226 aaKnown RBP18.38■□□□□ 0.53
COLCA2-201ENST00000398035 CFHR1Q03591 330 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 ANKRD20A4Q4UJ75 823 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 ZNF658BQ4V348 819 aaPredicted RBP18.38■□□□□ 0.53
COLCA2-201ENST00000398035 IZUMO3Q5VZ72 239 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 FOXR1Q6PIV2 292 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 ARHGAP22Q7Z5H3 698 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 JAMLQ86YT9 394 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 PDIK1LQ8N165 341 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 OTUD6BQ8N6M0 293 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 BBOF1Q8ND07 529 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 ASZ1Q8WWH4 475 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 ELMO1Q92556 727 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 PRR11Q96HE9 360 aaPredicted RBP18.38■□□□□ 0.53
COLCA2-201ENST00000398035 SIGLEC10Q96LC7 697 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 CCDC74BQ96LY2 380 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 OR52A5Q9H2C5 316 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 KIR3DX1Q9H7L2 352 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 MVB12BQ9H7P6 319 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 MAD1L1Q9Y6D9 718 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 RPS6KL1Q9Y6S9 549 aa18.38■□□□□ 0.53
COLCA2-201ENST00000398035 SPEGQ15772 3267 aa18.37■□□□□ 0.53
COLCA2-201ENST00000398035 SRRM3A6NNA2 597 aaPredicted RBP18.37■□□□□ 0.53
COLCA2-201ENST00000398035 H3BMM5 538 aa18.37■□□□□ 0.53
COLCA2-201ENST00000398035 FANCGO15287 622 aa18.37■□□□□ 0.53
COLCA2-201ENST00000398035 NVLO15381 856 aaKnown RBP18.37■□□□□ 0.53
COLCA2-201ENST00000398035 IVDP26440 423 aa18.37■□□□□ 0.53
COLCA2-201ENST00000398035 THOC5Q13769 683 aaKnown RBP18.37■□□□□ 0.53
COLCA2-201ENST00000398035 PLCL1Q15111 1095 aa18.37■□□□□ 0.53
COLCA2-201ENST00000398035 KCTD19Q17RG1 926 aaPredicted RBP18.37■□□□□ 0.53
COLCA2-201ENST00000398035 PTRHD1Q6GMV3 140 aaKnown RBP18.37■□□□□ 0.53
COLCA2-201ENST00000398035 NEPROQ6NW34 567 aa18.37■□□□□ 0.53
COLCA2-201ENST00000398035 CES3Q6UWW8 571 aa18.37■□□□□ 0.53
COLCA2-201ENST00000398035 LRRC69Q6ZNQ3 347 aa18.37■□□□□ 0.53
COLCA2-201ENST00000398035 C17orf53Q8N3J3 647 aaPredicted RBP18.37■□□□□ 0.53
COLCA2-201ENST00000398035 ZNF248Q8NDW4 579 aa18.37■□□□□ 0.53
COLCA2-201ENST00000398035 SPATA4Q8NEY3 305 aa18.37■□□□□ 0.53
COLCA2-201ENST00000398035 SPDYE1Q8NFV5 336 aaPredicted RBP18.37■□□□□ 0.53
COLCA2-201ENST00000398035 CALML6Q8TD86 181 aa18.37■□□□□ 0.53
COLCA2-201ENST00000398035 TFGQ92734 400 aaPredicted RBP18.37■□□□□ 0.53
COLCA2-201ENST00000398035 ASCL3Q9NQ33 180 aa18.37■□□□□ 0.53
COLCA2-201ENST00000398035 GNPTGQ9UJJ9 305 aa18.37■□□□□ 0.53
COLCA2-201ENST00000398035 CDRT15L2A8MXV6 281 aa18.36■□□□□ 0.53
COLCA2-201ENST00000398035 KDM1AO60341 852 aa18.36■□□□□ 0.53
COLCA2-201ENST00000398035 C9P02748 559 aa18.36■□□□□ 0.53
COLCA2-201ENST00000398035 ANKRD34CP0C6C1 535 aa18.36■□□□□ 0.53
COLCA2-201ENST00000398035 OGNP20774 298 aaKnown RBP18.36■□□□□ 0.53
COLCA2-201ENST00000398035 ARNTP27540 789 aa18.36■□□□□ 0.53
COLCA2-201ENST00000398035 CSF2RBP32927 897 aa18.36■□□□□ 0.53
COLCA2-201ENST00000398035 CAPZBP47756 277 aa18.36■□□□□ 0.53
COLCA2-201ENST00000398035 PCBP4P57723 403 aaKnown RBP18.36■□□□□ 0.53
COLCA2-201ENST00000398035 SEMA3AQ14563 771 aa18.36■□□□□ 0.53
COLCA2-201ENST00000398035 SYTL3Q4VX76 610 aa18.36■□□□□ 0.53
COLCA2-201ENST00000398035 CLEC14AQ86T13 490 aa18.36■□□□□ 0.53
COLCA2-201ENST00000398035 ACVR1CQ8NER5 493 aa18.36■□□□□ 0.53
COLCA2-201ENST00000398035 STAMBPL1Q96FJ0 436 aa18.36■□□□□ 0.53
COLCA2-201ENST00000398035 SNF8Q96H20 258 aa18.36■□□□□ 0.53
COLCA2-201ENST00000398035 KRT12Q99456 494 aa18.36■□□□□ 0.53
COLCA2-201ENST00000398035 MARCH4Q9P2E8 410 aaPredicted RBP18.36■□□□□ 0.53
COLCA2-201ENST00000398035 POLG2Q9UHN1 485 aa18.36■□□□□ 0.53
COLCA2-201ENST00000398035 SLC24A2Q9UI40 661 aa18.36■□□□□ 0.53
COLCA2-201ENST00000398035 RAXQ9Y2V3 346 aa18.36■□□□□ 0.53
COLCA2-201ENST00000398035 CFAP20Q9Y6A4 193 aaKnown RBP18.36■□□□□ 0.53
COLCA2-201ENST00000398035 FAM169AQ9Y6X4 670 aa18.36■□□□□ 0.53
COLCA2-201ENST00000398035 A0A087WV48 116 aa18.35■□□□□ 0.53
COLCA2-201ENST00000398035 A0A1W2PNU3 283 aaPredicted RBP18.35■□□□□ 0.53
COLCA2-201ENST00000398035 SLC5A10A0PJK1 596 aa18.35■□□□□ 0.53
COLCA2-201ENST00000398035 FAM187AA6NFU0 413 aa18.35■□□□□ 0.53
COLCA2-201ENST00000398035 EFCAB8A8MWE9 144 aa18.35■□□□□ 0.53
COLCA2-201ENST00000398035 CAPN5O15484 640 aaPredicted RBP18.35■□□□□ 0.53
COLCA2-201ENST00000398035 TTI1O43156 1089 aa18.35■□□□□ 0.53
COLCA2-201ENST00000398035 APOA4P06727 396 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms