RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 MYF6P23409 242 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 ATP5F1P24539 256 aaPredicted RBP5.29□□□□□ -1.56
VPS41-203ENST00000395969 OR1E1P30953 314 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 SLC1A2P43004 574 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 PTGER3P43115 390 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 TRPC1P48995 793 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 NUDT2P50583 147 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 TWF1Q12792 350 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 EFEMP1Q12805 493 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 NFATC3Q12968 1075 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 BMPR2Q13873 1038 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 RAB39AQ14964 217 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 PCBP2Q15366 365 aaKnown RBP eCLIP5.29□□□□□ -1.563e-8■■■■■ 34.3
VPS41-203ENST00000395969 SF3B4Q15427 424 aaKnown RBP eCLIP5.29□□□□□ -1.566e-7■■■■□ 24.9
VPS41-203ENST00000395969 DUSP6Q16828 381 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 GAB4Q2WGN9 574 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 CERCAMQ5T4B2 595 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 VWA5B1Q5TIE3 1220 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 ZCCHC8Q6NZY4 707 aaKnown RBP5.29□□□□□ -1.56
VPS41-203ENST00000395969 OTOP3Q7RTS5 596 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 STRA8Q7Z7C7 330 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 LSMEM2Q8N112 164 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 MYO1HQ8N1T3 1032 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 PDPRQ8NCN5 879 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 VN1R2Q8NFZ6 395 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 OR52K2Q8NGK3 314 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 SVIPQ8NHG7 77 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 RP9Q8TA86 221 aaKnown RBP5.29□□□□□ -1.56
VPS41-203ENST00000395969 FRS2Q8WU20 508 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 ASB12Q8WXK4 309 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 ZNF707Q96C28 371 aaPredicted RBP5.29□□□□□ -1.56
VPS41-203ENST00000395969 ULK4Q96C45 1275 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 FBXL8Q96CD0 374 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 CFAP36Q96G28 342 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 SLC29A1Q99808 456 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 TUBA1CQ9BQE3 449 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 SIAEQ9HAT2 523 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 NMRAL1Q9HBL8 299 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 CHRAC1Q9NRG0 131 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 PPT2Q9UMR5 302 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 SNX10Q9Y5X0 201 aa5.29□□□□□ -1.56
VPS41-203ENST00000395969 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 DLGAP1O14490 977 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 GIPC1O14908 333 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 JRKO75564 520 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 TSPAN12O95859 305 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 TOP3BO95985 862 aaKnown RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 NPPAP01160 153 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 RPS17P08708 135 aaKnown RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 ALOX5P09917 674 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 MSH3P20585 1137 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 PIK3R1P27986 724 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 PPM1FP49593 454 aaPredicted RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 TTPAP49638 278 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 IFITM2Q01629 132 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 PRKAA1Q13131 559 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 SP140Q13342 867 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 ZNF177Q13360 481 aaPredicted RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 GGTA1PQ4G0N0 100 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 FAM209AQ5JX71 171 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 RAP1GAP2Q684P5 730 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 MRNIPQ6NTE8 343 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 LGI2Q8N0V4 545 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 DTX3Q8N9I9 347 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 MFSD2AQ8NA29 543 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 CCNYQ8ND76 341 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 ANKK1Q8NFD2 765 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 TNIP2Q8NFZ5 429 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 ASB9Q96DX5 294 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 SCLYQ96I15 445 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 MRGPRX3Q96LB0 322 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 DEPDC7Q96QD5 511 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 ATOH8Q96SQ7 321 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 C1orf50Q9BV19 199 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 FICDQ9BVA6 458 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 C2orf49Q9BVC5 232 aaPredicted RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 COG4Q9H9E3 785 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 NANOGQ9H9S0 305 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 SP110Q9HB58 689 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 SRA1Q9HD15 236 aaKnown RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 ANKMY1Q9P2S6 941 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 PRG3Q9Y2Y8 225 aaPredicted RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 LRP4O75096 1905 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 ANKRD66B4E2M5 251 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 KDM1AO60341 852 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 KERAO60938 352 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 CPNE6O95741 557 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 LTA4HP09960 611 aaKnown RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 FBXO45P0C2W1 286 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 MPC1LP0DKB6 136 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 CD1DP15813 335 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 MSX2P35548 267 aaPredicted RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 KCNQ1P51787 676 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 TMBIM6P55061 237 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 CACNG1Q06432 222 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 SELENBP1Q13228 472 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 ITGADQ13349 1161 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 SPCS2Q15005 226 aa5.28□□□□□ -1.56
VPS41-203ENST00000395969 EIF4HQ15056 248 aaKnown RBP5.28□□□□□ -1.56
VPS41-203ENST00000395969 TRIM16LQ309B1 348 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms