RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 WDR12Q9GZL7 423 aaKnown RBP13.55□□□□□ -0.24
COL4A1-201ENST00000375820 CCNB1IP1Q9NPC3 277 aa13.55□□□□□ -0.24
COL4A1-201ENST00000375820 CCDC177Q9NQR7 707 aaPredicted RBP13.55□□□□□ -0.24
COL4A1-201ENST00000375820 ERVK-11Q9UQG0 969 aa13.55□□□□□ -0.24
COL4A1-201ENST00000375820 CLDN11O75508 207 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 THAP5Q7Z6K1 395 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 FOXRED2Q8IWF2 684 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 HAVCR1Q96D42 359 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.54□□□□□ -0.24
COL4A1-201ENST00000375820 PRDM16Q9HAZ2 1276 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 COL5A2P05997 1499 aaPredicted RBP13.54□□□□□ -0.24
COL4A1-201ENST00000375820 RNF225M0QZC1 329 aaPredicted RBP13.54□□□□□ -0.24
COL4A1-201ENST00000375820 FSCN2O14926 492 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 IFNW1P05000 195 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 ZNF806P0C7X5 589 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 ADRA1BP35368 520 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 ADAM17P78536 824 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 BRMS1LQ5PSV4 323 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 OR5M3Q8NGP4 307 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 RBM18Q96H35 190 aaKnown RBP13.54□□□□□ -0.24
COL4A1-201ENST00000375820 MTERF1Q99551 399 aaKnown RBP13.54□□□□□ -0.24
COL4A1-201ENST00000375820 IFT27Q9BW83 186 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 GBA3Q9H227 469 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 SNX7Q9UNH6 387 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 PTPRMP28827 1452 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 LOC100509620A0A075B734 347 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 SLC35F4A4IF30 521 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 TSPAN4O14817 238 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 CHST10O43529 356 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 VITQ6UXI7 678 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 USP30Q70CQ3 517 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 DEFB119Q8N690 84 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 PSMG2Q969U7 264 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 SLC38A3Q99624 504 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 NR2E1Q9Y466 385 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 RIPK3Q9Y572 518 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 FKBP7Q9Y680 259 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 CFAP20Q9Y6A4 193 aaKnown RBP13.54□□□□□ -0.24
COL4A1-201ENST00000375820 PGRP06401 933 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 PGAM2P15259 253 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 RHBDL3P58872 404 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 IRF9Q00978 393 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 ODF4Q2M2E3 257 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 CLEC4CQ8WTT0 213 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 SNTG1Q9NSN8 517 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 CCDC59Q9P031 241 aaKnown RBP13.54□□□□□ -0.24
COL4A1-201ENST00000375820 GTF2IRD1Q9UHL9 959 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 PADI3Q9ULW8 664 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 PCDHGB3Q9Y5G1 929 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 NWD1Q149M9 1564 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 ANXA2P2A6NMY6 339 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 ANXA2P07355 339 aaKnown RBP13.54□□□□□ -0.24
COL4A1-201ENST00000375820 ACRP10323 421 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 PPIBP23284 216 aaKnown RBP13.54□□□□□ -0.24
COL4A1-201ENST00000375820 SULT2A1Q06520 285 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 NDUFA9Q16795 377 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 RAB43Q86YS6 212 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 TCAIMQ8N3R3 496 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 SLC44A1Q8WWI5 657 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 TNFRSF25Q93038 417 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 CCDC120Q96HB5 630 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 COMMD3Q9UBI1 195 aa13.54□□□□□ -0.24
COL4A1-201ENST00000375820 ZNF536O15090 1300 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 SCGB1D2O95969 90 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 MAZP56270 477 aaKnown RBP13.53□□□□□ -0.24
COL4A1-201ENST00000375820 FAM13CQ8NE31 585 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 MSCO60682 206 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 ASGR1P07306 291 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 PBX3P40426 434 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 DPYSQ14117 519 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 OR8H3Q8N146 312 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 ZNF567Q8N184 647 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 OR5AK3PQ8NH89 298 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 PIGXQ8TBF5 258 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 MCCC2Q9HCC0 563 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 POLR3BQ9NW08 1133 aaPredicted RBP13.53□□□□□ -0.24
COL4A1-201ENST00000375820 CLUHO75153 1309 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 BBIP1A8MTZ0 92 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 A8MU76 341 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 SLC30A4O14863 429 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 KHNYNO15037 678 aaKnown RBP13.53□□□□□ -0.24
COL4A1-201ENST00000375820 UGT1A9O60656 530 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 CCNB2O95067 398 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 KELP23276 732 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 PARP15Q460N3 678 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 ATP13A5Q4VNC0 1218 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 LCN1P1Q5VSP4 162 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 ZYG11AQ6WRX3 759 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 SLC26A9Q7LBE3 791 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 TMC8Q8IU68 726 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 CD99L2Q8TCZ2 262 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 EFHD2Q96C19 240 aaPredicted RBP13.53□□□□□ -0.24
COL4A1-201ENST00000375820 OSBPL2Q9H1P3 480 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 UGT1A7Q9HAW7 530 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 UGT1A10Q9HAW8 530 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 UGT1A8Q9HAW9 530 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 MIOSQ9NXC5 875 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 ZNF510Q9Y2H8 683 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 PDPK1O15530 556 aa13.53□□□□□ -0.24
COL4A1-201ENST00000375820 CHP2O43745 196 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms