RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 GUCA1CO95843 209 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 OTCP00480 354 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 KLKB1P03952 638 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 ALPLP05186 524 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 THRBP10828 461 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 TCF3P15923 654 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 ATF6P18850 670 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 CACNG1Q06432 222 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 TWF1Q12792 350 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 SMARCB1Q12824 385 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 GPR162Q16538 588 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 RTP2Q5QGT7 225 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 FAM117BQ6P1L5 589 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 FIG4Q92562 907 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 THUMPD3Q9BV44 507 aaKnown RBP14.32□□□□□ -0.12
MSH5-201ENST00000375703 UGT2B28Q9BY64 529 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 PAIP1Q9H074 479 aaKnown RBP14.32□□□□□ -0.12
MSH5-201ENST00000375703 GKN1Q9NS71 199 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 DNAAF2Q9NVR5 837 aaKnown RBP14.32□□□□□ -0.12
MSH5-201ENST00000375703 VAPAQ9P0L0 249 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 GOLGA8CPA6NN73 597 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 NT5C1B-RDH14C9J2C7 533 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 DFNA5O60443 496 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 NOL3O60936 208 aaKnown RBP14.32□□□□□ -0.12
MSH5-201ENST00000375703 JAK1P23458 1154 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 SHMT2P34897 504 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 PTRHD1Q6GMV3 140 aaKnown RBP14.32□□□□□ -0.12
MSH5-201ENST00000375703 ZNF773Q6PK81 442 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 SBSNQ6UWP8 590 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 ZDHHC13Q8IUH4 622 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 PDPRQ8NCN5 879 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 OR8J3Q8NGG0 315 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 PPP3R2Q96LZ3 170 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 ZBTB18Q99592 522 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 GPR63Q9BZJ6 419 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 RRAGCQ9HB90 399 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 IL17CQ9P0M4 197 aa14.32□□□□□ -0.12
MSH5-201ENST00000375703 G3V2T6 193 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 RAD51BO15315 384 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 CORO1AP31146 461 aaKnown RBP14.31□□□□□ -0.12
MSH5-201ENST00000375703 HSPA7P48741 367 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 FCGRTP55899 365 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 ARF5P84085 180 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 GRSF1Q12849 480 aaKnown RBP eCLIP14.31□□□□□ -0.12
MSH5-201ENST00000375703 FUT10Q6P4F1 479 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 NCEH1Q6PIU2 408 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 OR2T12Q8NG77 320 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 CNDP2Q96KP4 475 aaKnown RBP14.31□□□□□ -0.12
MSH5-201ENST00000375703 TTLL2Q9BWV7 592 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 CIPCQ9C0C6 399 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 ADNPQ9H2P0 1102 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 NSUN3Q9H649 340 aaKnown RBP14.31□□□□□ -0.12
MSH5-201ENST00000375703 GORASP2Q9H8Y8 452 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 FANCEQ9HB96 536 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 TMEM161AQ9NX61 479 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 ADGRE2Q9UHX3 823 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 EIF3LQ9Y262 564 aaKnown RBP14.31□□□□□ -0.12
MSH5-201ENST00000375703 PCDHB9Q9Y5E1 797 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 PCDHB1Q9Y5F3 818 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 ANKRD12Q6UB98 2062 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 A0A1B0GVM2 712 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 TBC1D4O60343 1298 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 MBL2P11226 248 aaPredicted RBP14.31□□□□□ -0.12
MSH5-201ENST00000375703 ITGB6P18564 788 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 MATN1P21941 496 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 RPL38P63173 70 aaKnown RBP14.31□□□□□ -0.12
MSH5-201ENST00000375703 KIAA0040Q15053 153 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 HECTD3Q5T447 861 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 TRAF7Q6Q0C0 670 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 THAP5Q7Z6K1 395 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 PDZD8Q8NEN9 1154 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 OR10A6Q8NH74 314 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 FBXO30Q8TB52 745 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 SDCCAG3Q96C92 435 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 FAM210AQ96ND0 272 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 SMPD4Q9NXE4 827 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 LMCD1Q9NZU5 365 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 TMEM9Q9P0T7 183 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 LIMD1Q9UGP4 676 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 ANGPTL3Q9Y5C1 460 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 GBF1Q92538 1859 aa14.31□□□□□ -0.12
MSH5-201ENST00000375703 H7C4K7 107 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 COCHO43405 550 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 PRAMEF12O95522 483 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 CPNE6O95741 557 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 CD160O95971 181 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 GATMP50440 423 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 TRAF3Q13114 568 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 MAPKAPK3Q16644 382 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 BROXQ5VW32 411 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 SULT1C3Q6IMI6 304 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 CHST9Q7L1S5 443 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 TAS1R1Q7RTX1 841 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 OR13F1Q8NGS4 319 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 TBC1D15Q8TC07 691 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 SLC13A3Q8WWT9 602 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 EID2BQ96D98 161 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 AURKBQ96GD4 344 aaPredicted RBP14.3□□□□□ -0.12
MSH5-201ENST00000375703 CLPBQ9H078 707 aa14.3□□□□□ -0.12
MSH5-201ENST00000375703 MARCH5Q9NX47 278 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms