RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 CDV3Q9UKY7 258 aaKnown RBP11.39□□□□□ -0.59
USF1-201ENST00000368019 PAIP2BQ9ULR5 123 aaKnown RBP11.39□□□□□ -0.59
USF1-201ENST00000368019 PCDHA9Q9Y5H5 950 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 MYO16Q9Y6X6 1858 aa11.39□□□□□ -0.59
USF1-201ENST00000368019 TCRBV5S2A0A599 114 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 DCDC2BA2VCK2 349 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 TTC36A6NLP5 189 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 HHLA1C9JL84 531 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 H3BMQ9 156 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 UBXN8O00124 270 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 CLOCKO15516 846 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 HCRTO43612 131 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 PRR35P0CG20 571 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 HNRNPLP14866 589 aaKnown RBP eCLIP11.38□□□□□ -0.59
USF1-201ENST00000368019 SAT1P21673 171 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 SLC6A2P23975 617 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 HTR1EP28566 365 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 TUFMP49411 452 aaKnown RBP11.38□□□□□ -0.59
USF1-201ENST00000368019 PSMD7P51665 324 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 GABARAPL2P60520 117 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 ACVR1Q04771 509 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 SRSF5Q13243 272 aaKnown RBP11.38□□□□□ -0.59
USF1-201ENST00000368019 SIM2Q14190 667 aaPredicted RBP11.38□□□□□ -0.59
USF1-201ENST00000368019 C16orf72Q14CZ0 275 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 SLC39A12Q504Y0 691 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 UNC50Q53HI1 259 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 RBM48Q5RL73 367 aaKnown RBP11.38□□□□□ -0.59
USF1-201ENST00000368019 HECTD2Q5U5R9 776 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 KANK2Q63ZY3 851 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 ZNF773Q6PK81 442 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 CYHR1Q6ZMK1 362 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 BHLHA9Q7RTU4 235 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 TMEM150AQ86TG1 271 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 RETREG3Q86VR2 466 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 GALNT13Q8IUC8 556 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 DCP1BQ8IZD4 617 aaKnown RBP11.38□□□□□ -0.59
USF1-201ENST00000368019 SYNPOQ8N3V7 929 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 CHCHD4Q8N4Q1 142 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 AADATQ8N5Z0 425 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 BPIFB1Q8TDL5 484 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 GIPC3Q8TF64 312 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 RAB2BQ8WUD1 216 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 COG8Q96MW5 612 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 APOL2Q9BQE5 337 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 FAM83CQ9BQN1 747 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 MED10Q9BTT4 135 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 C1orf50Q9BV19 199 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 SLC46A2Q9BY10 475 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 SLC25A51Q9H1U9 297 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 MAP10Q9P2G4 905 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 EBF1Q9UH73 591 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 DSEQ9UL01 958 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 CDH9Q9ULB4 789 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 RAB23Q9ULC3 237 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 NEU3Q9UQ49 428 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 FADS3Q9Y5Q0 445 aa11.38□□□□□ -0.59
USF1-201ENST00000368019 NYNRINQ9P2P1 1898 aaKnown RBP11.38□□□□□ -0.59
USF1-201ENST00000368019 KIAA1549LQ6ZVL6 1849 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 A0A1W2PP18 115 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 CCDC78A2IDD5 438 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 CCDC162PA2VCL2 907 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 SAC3D1A6NKF1 404 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 YJEFN3A6XGL0 299 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 SLC30A4O14863 429 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 ARPC2O15144 300 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 MAFKO60675 156 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 TULP3O75386 442 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 EEDO75530 441 aaKnown RBP11.37□□□□□ -0.59
USF1-201ENST00000368019 BEST1O76090 585 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 SUPT7LO94864 414 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 ALDOCP09972 364 aaKnown RBP11.37□□□□□ -0.59
USF1-201ENST00000368019 HAPLN1P10915 354 aaPredicted RBP11.37□□□□□ -0.59
USF1-201ENST00000368019 NCAM1P13591 858 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 HMGA1P17096 107 aaKnown RBP11.37□□□□□ -0.59
USF1-201ENST00000368019 OGNP20774 298 aaKnown RBP11.37□□□□□ -0.59
USF1-201ENST00000368019 FDXRP22570 491 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 STT3AP46977 705 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 C21orf59P57076 290 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 CYP4F8P98187 520 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 SMARCB1Q12824 385 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 CBX3Q13185 183 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 TOP3AQ13472 1001 aaPredicted RBP11.37□□□□□ -0.59
USF1-201ENST00000368019 RAB39AQ14964 217 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 PON2Q15165 354 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 SMAD1Q15797 465 aaKnown RBP11.37□□□□□ -0.59
USF1-201ENST00000368019 CRY1Q16526 586 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 CSRP2Q16527 193 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 ARHGAP15Q53QZ3 475 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 NIPAL1Q6NVV3 410 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 BLOC1S3Q6QNY0 202 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 KDELC1Q6UW63 502 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 CYP2R1Q6VVX0 501 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 NEK10Q6ZWH5 1172 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 SFRP1Q8N474 314 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 TTC30BQ8N4P2 665 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 IPMKQ8NFU5 416 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 OR13F1Q8NGS4 319 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 GPR150Q8NGU9 434 aa11.37□□□□□ -0.59
USF1-201ENST00000368019 C2orf15Q8WU43 125 aaKnown RBP11.37□□□□□ -0.59
USF1-201ENST00000368019 LRRC58Q96CX6 371 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms