RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 RRM2BQ7LG56 351 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 NPAS4Q8IUM7 802 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 TRAPPC5Q8IUR0 188 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 LIX1Q8N485 282 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 ZBTB2Q8N680 514 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 TERB1Q8NA31 727 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 AUTS2Q8WXX7 1259 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 SLC47A1Q96FL8 570 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 HIPK3Q9H422 1215 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 NSUN3Q9H649 340 aaKnown RBP12.09□□□□□ -0.47
COL20A1-201ENST00000358894 IGSF5Q9NSI5 407 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 TMEM39AQ9NV64 488 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 FNIP2Q9P278 1114 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 MYO7AQ13402 2215 aa12.09□□□□□ -0.47
COL20A1-201ENST00000358894 LCHNA4D1U4 455 aa12.08□□□□□ -0.47
COL20A1-201ENST00000358894 AQP12BA6NM10 295 aa12.08□□□□□ -0.47
COL20A1-201ENST00000358894 CCNA2P20248 432 aa12.08□□□□□ -0.47
COL20A1-201ENST00000358894 DNAJB1P25685 340 aa12.08□□□□□ -0.47
COL20A1-201ENST00000358894 PRKCQQ04759 706 aa12.08□□□□□ -0.47
COL20A1-201ENST00000358894 OR4D1Q15615 310 aa12.08□□□□□ -0.47
COL20A1-201ENST00000358894 OTUD1Q5VV17 481 aaPredicted RBP12.08□□□□□ -0.47
COL20A1-201ENST00000358894 AQP12AQ8IXF9 295 aa12.08□□□□□ -0.47
COL20A1-201ENST00000358894 NAT16Q8N8M0 369 aa12.08□□□□□ -0.47
COL20A1-201ENST00000358894 SMYD1Q8NB12 490 aa12.08□□□□□ -0.47
COL20A1-201ENST00000358894 CITED4Q96RK1 184 aa12.08□□□□□ -0.47
COL20A1-201ENST00000358894 DYRK1BQ9Y463 629 aa12.08□□□□□ -0.47
COL20A1-201ENST00000358894 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.08□□□□□ -0.48
COL20A1-201ENST00000358894 GJB3O75712 270 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 CATP04040 527 aaKnown RBP12.08□□□□□ -0.48
COL20A1-201ENST00000358894 TTKP33981 857 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 MAPK8P45983 427 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 TPTEP56180 551 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 GPR17Q13304 367 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 RAB41Q5JT25 222 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 CYP20A1Q6UW02 462 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 CHSY3Q70JA7 882 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 NUSAP1Q9BXS6 441 aaKnown RBP12.08□□□□□ -0.48
COL20A1-201ENST00000358894 SOX17Q9H6I2 414 aaPredicted RBP12.08□□□□□ -0.48
COL20A1-201ENST00000358894 REEP1Q9H902 201 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 GJD2Q9UKL4 321 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 A0A1W2PQ67 120 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 ELOVL7A1L3X0 281 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 CAPN15O75808 1086 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 GKP32189 559 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 CSKP41240 450 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 POLR2LP62875 67 aaKnown RBP12.08□□□□□ -0.48
COL20A1-201ENST00000358894 PWP1Q13610 501 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 MORN1Q5T089 497 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 DEPDC1Q5TB30 811 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 CES4AQ5XG92 561 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 TRIM63Q969Q1 353 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 PTERQ96BW5 349 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 MAGED4Q96JG8 741 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 C11orf84Q9BUA3 381 aaPredicted RBP12.08□□□□□ -0.48
COL20A1-201ENST00000358894 RAD21L1Q9H4I0 556 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 MIEF1Q9NQG6 463 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 SPG21Q9NZD8 308 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 NOBOXO60393 691 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 THRBP10828 461 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 CSTF3Q12996 717 aaKnown RBP12.08□□□□□ -0.48
COL20A1-201ENST00000358894 CAMK2GQ13555 558 aaPredicted RBP12.08□□□□□ -0.48
COL20A1-201ENST00000358894 OGFRL1Q5TC84 451 aaPredicted RBP12.08□□□□□ -0.48
COL20A1-201ENST00000358894 TXNDC8Q6A555 127 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 OR52E8Q6IFG1 317 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 FIBCD1Q8N539 461 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 SLC13A3Q8WWT9 602 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 KLHL32Q96NJ5 620 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 DEFB118Q96PH6 123 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 ASB3Q9Y575 518 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 PCDHGA4Q9Y5G9 962 aa12.08□□□□□ -0.48
COL20A1-201ENST00000358894 A0A1W2PP18 115 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 OR2AG2A6NM03 316 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 G6PDP11413 515 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 HOXD12P35452 270 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 ATP6V1E1P36543 226 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 SPAM1P38567 509 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 CRATP43155 626 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 BNIP3Q12983 259 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 ERMP1Q7Z2K6 904 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 OR10Q1Q8NGQ4 319 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 OR9Q1Q8NGQ5 310 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 FBXL20Q96IG2 436 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 SLC45A3Q96JT2 553 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 ZNF599Q96NL3 588 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 SMIM14Q96QK8 99 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 LRRC3Q9BY71 257 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 MEAF6Q9HAF1 191 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 SAMHD1Q9Y3Z3 626 aaKnown RBP12.07□□□□□ -0.48
COL20A1-201ENST00000358894 TRIP11Q15643 1979 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 ILVBLA1L0T0 632 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 FAM234BA2RU67 622 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 UNCXA6NJT0 531 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 PDZK1P1A8MUH7 402 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 HTRA2O43464 458 aaPredicted RBP12.07□□□□□ -0.48
COL20A1-201ENST00000358894 IDH3BO43837 385 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 ARRB2P32121 409 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 SLC26A3P40879 764 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 TGFBIQ15582 683 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 CMPK2Q5EBM0 449 aa12.07□□□□□ -0.48
COL20A1-201ENST00000358894 PAGE2BQ5JRK9 111 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms