RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 A0A1B0GVM2 712 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 TCAF2A6NFQ2 919 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 CHKAP35790 457 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 BACE1P56817 501 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 ZNF567Q8N184 647 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 TM9SF3Q9HD45 589 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 NUP98P52948 1817 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 IL7P13232 177 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 PVALBP20472 110 aaPredicted RBP6.49□□□□□ -1.37
VPS13B-202ENST00000357162 KELP23276 732 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 GMPRP36959 345 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 AP1S1P61966 158 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 PPATQ06203 517 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 HMGN3Q15651 99 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 ZNF630Q2M218 657 aaPredicted RBP6.49□□□□□ -1.37
VPS13B-202ENST00000357162 ZBTB26Q9HCK0 441 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 TLN2Q9Y4G6 2542 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 GNAO1P09471 354 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 CD97P48960 835 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 MTAPQ13126 283 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 CAMKK1Q8N5S9 505 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 FTHL17Q9BXU8 183 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 UCK2Q9BZX2 261 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 ZNHIT2Q9UHR6 403 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 SNX8Q9Y5X2 465 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 ALG5Q9Y673 324 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 POLRMTO00411 1230 aaKnown RBP6.49□□□□□ -1.37
VPS13B-202ENST00000357162 ACOX3O15254 700 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 IL3P08700 152 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 SNHG28P0DPA3 235 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 CYCSP99999 105 aaKnown RBP6.49□□□□□ -1.37
VPS13B-202ENST00000357162 MED22Q15528 200 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 TMEM53Q6P2H8 277 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 VSTM1Q6UX27 236 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 LRRC71Q8N4P6 559 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 PCDH12Q9NPG4 1184 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 FARSBQ9NSD9 589 aaKnown RBP6.49□□□□□ -1.37
VPS13B-202ENST00000357162 UCKL1Q9NWZ5 548 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 MALT1Q9UDY8 824 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 TMEM5Q9Y2B1 443 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 INMTO95050 263 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 RAB36O95755 333 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 PSMB4P28070 264 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 SPIBQ01892 262 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 RBBP4Q09028 425 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 CDKL4Q5MAI5 379 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 FAM131BQ86XD5 332 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 ITPAQ9BY32 194 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 SEC14L3Q9UDX4 400 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 TMEM127O75204 238 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 RAD17O75943 681 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 PRKCHP24723 683 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 CLK3P49761 638 aaKnown RBP6.49□□□□□ -1.37
VPS13B-202ENST00000357162 APLP1P51693 650 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 NDST2P52849 883 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 NOMO3P69849 1222 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 MYBPC1Q00872 1141 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 USP30Q70CQ3 517 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 PNMA5Q96PV4 448 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 PHOX2BQ99453 314 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 POTEKPQ9BYX7 375 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 SLA2Q9H6Q3 261 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 PCDHB5Q9Y5E4 795 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 N4BP2Q86UW6 1770 aaPredicted RBP6.49□□□□□ -1.37
VPS13B-202ENST00000357162 SCN11AQ9UI33 1791 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 PCDHGA12O60330 932 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 B3GAT3O94766 335 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 TYMPP19971 482 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 CAP2P40123 477 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 PLD5Q8N7P1 536 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 C1GALT1C1Q96EU7 318 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 EBF3Q9H4W6 596 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 PCDHGA11Q9Y5H2 935 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 SCNN1BP51168 640 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 SEMA5AQ13591 1074 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 FAM35AQ86V20 835 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 ZC3HC1Q86WB0 502 aaKnown RBP6.49□□□□□ -1.37
VPS13B-202ENST00000357162 DCP2Q8IU60 420 aaKnown RBP6.49□□□□□ -1.37
VPS13B-202ENST00000357162 ZBED6CLQ96FA7 236 aaPredicted RBP6.49□□□□□ -1.37
VPS13B-202ENST00000357162 BTN2A3PQ96KV6 586 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 CCM2LQ9NUG4 571 aaPredicted RBP6.49□□□□□ -1.37
VPS13B-202ENST00000357162 FAM120CQ9NX05 1096 aaKnown RBP6.49□□□□□ -1.37
VPS13B-202ENST00000357162 ATF4P18848 351 aaPredicted RBP6.49□□□□□ -1.37
VPS13B-202ENST00000357162 GPR33Q49SQ1 333 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 AGMOQ6ZNB7 445 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 PFDN5Q99471 154 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 FER1L5A0AVI2 2057 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 NRCAMQ92823 1304 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 DUXAA6NLW8 204 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 RDH16O75452 317 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 CXCR4P61073 352 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 TPRG1LQ5T0D9 272 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 IL23RQ5VWK5 629 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 SLC44A3Q8N4M1 653 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 OR4L1Q8NH43 312 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 STYXQ8WUJ0 223 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 RASSF1Q9NS23 344 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 ZNF639Q9UID6 485 aa6.49□□□□□ -1.37
VPS13B-202ENST00000357162 OR6C75A6NL08 312 aa6.48□□□□□ -1.37
VPS13B-202ENST00000357162 B8ZZF3 427 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms