RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 GOLGA4Q13439 2230 aaKnown RBP17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 CASC3O15234 703 aaKnown RBP17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 KCNJ13O60928 360 aa17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 SPAG6O75602 509 aa17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 FAM155BO75949 473 aa17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 CD151P48509 253 aa17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 NOVA1P51513 510 aaKnown RBP17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 PMS2P54278 862 aa17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 HSPA14Q0VDF9 509 aa17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 NR0B2Q15466 257 aa17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 GLIPR1L2Q4G1C9 344 aa17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 SYTL3Q4VX76 610 aa17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 C14orf28Q4W4Y0 310 aa17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 CYS1Q717R9 158 aa17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 VRK3Q8IV63 474 aa17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 EIF1ADQ8N9N8 165 aaKnown RBP17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 ACVR1CQ8NER5 493 aa17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 MYRIPQ8NFW9 859 aa17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 SLC30A3Q99726 388 aa17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 TXLNGYQ9BZA5 131 aa17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 CCDC68Q9H2F9 335 aa17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 SLC32A1Q9H598 525 aa17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 RABGEF1Q9UJ41 708 aa17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 PADI4Q9UM07 663 aa17.52■□□□□ 0.39
PDLIM7-202ENST00000355841 ZFC3H1O60293 1989 aaKnown RBP17.51■□□□□ 0.39
PDLIM7-202ENST00000355841 AOAHP28039 575 aa17.51■□□□□ 0.39
PDLIM7-202ENST00000355841 DUS1LQ6P1R4 473 aaKnown RBP17.51■□□□□ 0.39
PDLIM7-202ENST00000355841 ABRAXAS1Q6UWZ7 409 aa17.51■□□□□ 0.39
PDLIM7-202ENST00000355841 OTOAQ7RTW8 1153 aa17.51■□□□□ 0.39
PDLIM7-202ENST00000355841 ZNF761Q86XN6 746 aaPredicted RBP17.51■□□□□ 0.39
PDLIM7-202ENST00000355841 SFRP1Q8N474 314 aa17.51■□□□□ 0.39
PDLIM7-202ENST00000355841 ARL14Q8N4G2 192 aa17.51■□□□□ 0.39
PDLIM7-202ENST00000355841 GPATCH11Q8N954 259 aa17.51■□□□□ 0.39
PDLIM7-202ENST00000355841 SIDT2Q8NBJ9 832 aaKnown RBP17.51■□□□□ 0.39
PDLIM7-202ENST00000355841 CDKL2Q92772 493 aa17.51■□□□□ 0.39
PDLIM7-202ENST00000355841 PANX3Q96QZ0 392 aa17.51■□□□□ 0.39
PDLIM7-202ENST00000355841 CDC6Q99741 560 aa17.51■□□□□ 0.39
PDLIM7-202ENST00000355841 AARSD1Q9BTE6 412 aaKnown RBP17.51■□□□□ 0.39
PDLIM7-202ENST00000355841 TSSK1BQ9BXA7 367 aa17.51■□□□□ 0.39
PDLIM7-202ENST00000355841 ZNF624Q9P2J8 865 aaPredicted RBP17.51■□□□□ 0.39
PDLIM7-202ENST00000355841 SLC5A10A0PJK1 596 aa17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 E5RI56 91 aa17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 F8W8V4 182 aa17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 TNFSF14O43557 240 aa17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 SLC35G4P0C7Q5 338 aa17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 CKMT1AP12532 417 aa17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 CKMT2P17540 419 aa17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 CSRP1P21291 193 aaKnown RBP17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 PHBP35232 272 aa17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 CDKN2DP55273 166 aa17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 PIM3Q86V86 326 aa17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 SLC26A11Q86WA9 606 aa17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 ZC3HC1Q86WB0 502 aaKnown RBP17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 GLMNQ92990 594 aa17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 RMDN2Q96LZ7 410 aa17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 INSM2Q96T92 566 aaPredicted RBP17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 RTKNQ9BST9 563 aa17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 OR52A5Q9H2C5 316 aa17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 IMP3Q9NV31 184 aaKnown RBP17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 DLL3Q9NYJ7 618 aa17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 ACSL5Q9ULC5 683 aa17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 CDYLQ9Y232 598 aa17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 RNF215Q9Y6U7 377 aa17.5■□□□□ 0.39
PDLIM7-202ENST00000355841 KLHL33A6NCF5 533 aa17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 H3BMM5 538 aa17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 LIN7AO14910 233 aaPredicted RBP17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 PPM1DO15297 605 aa17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 SAT1P21673 171 aa17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 RPIAP49247 311 aa17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 CLCN7P51798 805 aa17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 SIM1P81133 766 aaPredicted RBP17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 TIAL1Q01085 375 aaKnown RBP eCLIP17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 RPE65Q16518 533 aa17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 PERM1Q5SV97 790 aa17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 AGAP9Q5VTM2 703 aa17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 WDR93Q6P2C0 686 aa17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 ZNF449Q6P9G9 518 aa17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 WASH2PQ6VEQ5 465 aa17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 GALNT7Q86SF2 657 aa17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 C17orf82Q86X59 251 aaPredicted RBP17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 GIMAP7Q8NHV1 300 aa17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 MAPK15Q8TD08 544 aa17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 TMEM159Q96B96 161 aa17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 C12orf66Q96MD2 445 aa17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 GPR21Q99679 349 aa17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 WASH6PQ9NQA3 447 aa17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 LRIT1Q9P2V4 623 aa17.49■□□□□ 0.39
PDLIM7-202ENST00000355841 RIPK2O43353 540 aa17.48■□□□□ 0.39
PDLIM7-202ENST00000355841 GPC4O75487 556 aa17.48■□□□□ 0.39
PDLIM7-202ENST00000355841 KCNK5O95279 499 aa17.48■□□□□ 0.39
PDLIM7-202ENST00000355841 APOA4P06727 396 aa17.48■□□□□ 0.39
PDLIM7-202ENST00000355841 GSTM1P09488 218 aa17.48■□□□□ 0.39
PDLIM7-202ENST00000355841 SLC19A1P41440 591 aa17.48■□□□□ 0.39
PDLIM7-202ENST00000355841 HALP42357 657 aa17.48■□□□□ 0.39
PDLIM7-202ENST00000355841 GSTM4Q03013 218 aa17.48■□□□□ 0.39
PDLIM7-202ENST00000355841 BIRC2Q13490 618 aa17.48■□□□□ 0.39
PDLIM7-202ENST00000355841 HECTD2Q5U5R9 776 aa17.48■□□□□ 0.39
PDLIM7-202ENST00000355841 TRMT10CQ7L0Y3 403 aaKnown RBP17.48■□□□□ 0.39
PDLIM7-202ENST00000355841 EFL1Q7Z2Z2 1120 aaKnown RBP17.48■□□□□ 0.39
PDLIM7-202ENST00000355841 IFI44Q8TCB0 444 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms