RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 EPHA3P29320 983 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 ADORA1P30542 326 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 OR3A3P47888 321 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 OR3A2P47893 321 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 RAB41Q5JT25 222 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 FAM109AQ8N4B1 249 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 FCAMRQ8WWV6 532 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 TNFRSF25Q93038 417 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 NKD1Q969G9 470 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 COA7Q96BR5 231 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 FAM136AQ96C01 138 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 CCDC120Q96HB5 630 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 MYRFLQ96LU7 910 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 KLHL15Q96M94 604 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 MTG2Q9H4K7 406 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 PCDHGC3Q9UN70 934 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 SETBP1Q9Y6X0 1596 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 WDR87Q6ZQQ6 2873 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 TRAPPC13A5PLN9 417 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 DCLK1O15075 740 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 RNASEH2AO75792 299 aaKnown RBP6.1□□□□□ -1.43
VCAN-203ENST00000343200 CYP17A1P05093 508 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 CDK2P24941 298 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 GRIA2P42262 883 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 MAPK9P45984 424 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 DNASE1L1P49184 302 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 IDH3GP51553 393 aaPredicted RBP6.1□□□□□ -1.43
VCAN-203ENST00000343200 GPRIN3Q6ZVF9 776 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 CREB3L2Q70SY1 520 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 SGMS1Q86VZ5 419 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 C7orf61Q8IZ16 206 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 ANKFN1Q8N957 763 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 CHST4Q8NCG5 386 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 TMEM159Q96B96 161 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 SMARCD1Q96GM5 515 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 ZDHHC12Q96GR4 267 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 TRMOQ9BU70 441 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 FAM49AQ9H0Q0 323 aaPredicted RBP6.1□□□□□ -1.43
VCAN-203ENST00000343200 XPNPEP3Q9NQH7 507 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 PLLPQ9Y342 182 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 CACNA1HO95180 2353 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 ANKRD33BA6NCL7 494 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 TSHRP16473 764 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 ITGB6P18564 788 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 CHATP28329 748 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 CD97P48960 835 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 GBX2P52951 348 aaPredicted RBP6.1□□□□□ -1.43
VCAN-203ENST00000343200 RAB8AP61006 207 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 BNIP3Q12983 259 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 RABL3Q5HYI8 236 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 ZNF627Q7L945 461 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 ZNF367Q7RTV3 350 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 METTL3Q86U44 580 aaKnown RBP6.1□□□□□ -1.43
VCAN-203ENST00000343200 OR2AP1Q8NGE2 309 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 LILRB4Q8NHJ6 448 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 PEX13Q92968 403 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 TMEM209Q96SK2 561 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 TBL1YQ9BQ87 522 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 CCDC32Q9BV29 185 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 EGFL7Q9UHF1 273 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 PCDHGB7Q9Y5F8 929 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 PLXNB3Q9ULL4 1909 aa6.1□□□□□ -1.43
VCAN-203ENST00000343200 TNFRSF10AO00220 468 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 C8BP07358 591 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 VARSP26640 1264 aaKnown RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 SLC7A1P30825 629 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 PLK1P53350 603 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 EN1Q05925 392 aaPredicted RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 ACSM2AQ08AH3 577 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 BMPR2Q13873 1038 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 GRM4Q14833 912 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 CDK10Q15131 360 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 TCEA2Q15560 299 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 TSGA10IPQ3SY00 556 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ACSM2BQ68CK6 577 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 TM9SF2Q99805 663 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 KXD1Q9BQD3 176 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 BRD9Q9H8M2 597 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ABI2Q9NYB9 513 aaPredicted RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 PCDHA3Q9Y5H8 950 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 GVINP1Q7Z2Y8 2422 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ZNF804BA4D1E1 1349 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 OR6C74A6NCV1 312 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 COQ9O75208 318 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 OTCP00480 354 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 PAEPP09466 180 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 CYP2F1P24903 491 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 HSD17B2P37059 387 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 FABP6P51161 128 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 POLR2JP52435 117 aaKnown RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 BCAT1P54687 386 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 ERVK-9P63128 1117 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 GALNT1Q10472 559 aaPredicted RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 FASTKD3Q14CZ7 662 aaKnown RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 ZNF662Q6ZS27 426 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 COX15Q7KZN9 410 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 DET1Q7L5Y6 550 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 SLC47A2Q86VL8 602 aa6.09□□□□□ -1.43
VCAN-203ENST00000343200 CAND1Q86VP6 1230 aaKnown RBP6.09□□□□□ -1.43
VCAN-203ENST00000343200 FOXRED2Q8IWF2 684 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms