RNA–Protein interactions for RNA: ENST00000328863.8

CLRN1-203, Transcript of clarin 1, humanhuman

TSL 1 (best) BASIC

Gene CLRN1, Length 738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-203ENST00000328863 CLCA4Q14CN2 919 aa14.51□□□□□ -0.09
CLRN1-203ENST00000328863 TMED2Q15363 201 aa14.51□□□□□ -0.09
CLRN1-203ENST00000328863 RPE65Q16518 533 aa14.51□□□□□ -0.09
CLRN1-203ENST00000328863 TYSND1Q2T9J0 566 aa14.51□□□□□ -0.09
CLRN1-203ENST00000328863 NKAIN2Q5VXU1 208 aa14.51□□□□□ -0.09
CLRN1-203ENST00000328863 KLHL35Q6PF15 583 aa14.51□□□□□ -0.09
CLRN1-203ENST00000328863 IGF2-ASQ6U949 168 aa14.51□□□□□ -0.09
CLRN1-203ENST00000328863 SDCCAG8Q86SQ7 713 aaPredicted RBP14.51□□□□□ -0.09
CLRN1-203ENST00000328863 LRRC6Q86X45 466 aa14.51□□□□□ -0.09
CLRN1-203ENST00000328863 PROSER1Q86XN7 944 aa14.51□□□□□ -0.09
CLRN1-203ENST00000328863 SPATA4Q8NEY3 305 aa14.51□□□□□ -0.09
CLRN1-203ENST00000328863 STAMBPL1Q96FJ0 436 aa14.51□□□□□ -0.09
CLRN1-203ENST00000328863 CCDC74BQ96LY2 380 aa14.51□□□□□ -0.09
CLRN1-203ENST00000328863 PANX3Q96QZ0 392 aa14.51□□□□□ -0.09
CLRN1-203ENST00000328863 TBC1D10AQ9BXI6 508 aa14.51□□□□□ -0.09
CLRN1-203ENST00000328863 THSD1Q9NS62 852 aa14.51□□□□□ -0.09
CLRN1-203ENST00000328863 VPS9D1Q9Y2B5 631 aa14.51□□□□□ -0.09
CLRN1-203ENST00000328863 LOXL2Q9Y4K0 774 aa14.51□□□□□ -0.09
CLRN1-203ENST00000328863 MN1Q10571 1320 aaPredicted RBP14.5□□□□□ -0.09
CLRN1-203ENST00000328863 UBA6A0AVT1 1052 aaPredicted RBP14.5□□□□□ -0.09
CLRN1-203ENST00000328863 EFCAB8A8MWE9 144 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 KIF2AO00139 706 aaPredicted RBP14.5□□□□□ -0.09
CLRN1-203ENST00000328863 PLD2O14939 933 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 OR1I1O60431 355 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 NDUFS3O75489 264 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 DXOO77932 396 aaKnown RBP14.5□□□□□ -0.09
CLRN1-203ENST00000328863 UBXN7O94888 489 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 AMD1P17707 334 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 PGAM1P18669 254 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 ARNTP27540 789 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 RBMS1P29558 406 aaKnown RBP14.5□□□□□ -0.09
CLRN1-203ENST00000328863 LIMK2P53671 638 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 ZFP36L1Q07352 338 aaKnown RBP14.5□□□□□ -0.09
CLRN1-203ENST00000328863 CYP4F3Q08477 520 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 C2orf54Q08AI8 447 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 SQSTM1Q13501 440 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 THOC5Q13769 683 aaKnown RBP14.5□□□□□ -0.09
CLRN1-203ENST00000328863 KRT33BQ14525 404 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 TBC1D25Q3MII6 688 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 DUS1LQ6P1R4 473 aaKnown RBP14.5□□□□□ -0.09
CLRN1-203ENST00000328863 TMEM71Q6P5X7 295 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 WDR74Q6RFH5 385 aaPredicted RBP14.5□□□□□ -0.09
CLRN1-203ENST00000328863 CES3Q6UWW8 571 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 USP53Q70EK8 1073 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 RAB11FIP2Q7L804 512 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 MAATS1Q7Z4T9 603 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 PDZD3Q86UT5 571 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 PLXDC1Q8IUK5 500 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 LMNTD2Q8IXW0 634 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 PDIK1LQ8N165 341 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 BBOF1Q8ND07 529 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 GABPB2Q8TAK5 448 aaPredicted RBP14.5□□□□□ -0.09
CLRN1-203ENST00000328863 NAT9Q9BTE0 207 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 SLC40A1Q9NP59 571 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 MARCH4Q9P2E8 410 aaPredicted RBP14.5□□□□□ -0.09
CLRN1-203ENST00000328863 PRSS21Q9Y6M0 314 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 COLEC10Q9Y6Z7 277 aa14.5□□□□□ -0.09
CLRN1-203ENST00000328863 IGHV5-10-1A0A0J9YXX1 117 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 FAM187AA6NFU0 413 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 SEC31AO94979 1220 aaKnown RBP14.49□□□□□ -0.09
CLRN1-203ENST00000328863 TTC4O95801 387 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 TUBB4AP04350 444 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 POLBP06746 335 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 ITGA2BP08514 1039 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 RPS3P23396 243 aaKnown RBP eCLIP14.49□□□□□ -0.09
CLRN1-203ENST00000328863 CD151P48509 253 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 EIF3BP55884 814 aaKnown RBP14.49□□□□□ -0.09
CLRN1-203ENST00000328863 HIF1AQ16665 826 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 LONRF1Q17RB8 773 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 ANKRD20A4Q4UJ75 823 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 ZNF470Q6ECI4 717 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 PTRHD1Q6GMV3 140 aaKnown RBP14.49□□□□□ -0.09
CLRN1-203ENST00000328863 FOXR1Q6PIV2 292 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 TMPRSS9Q7Z410 1059 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 LDB1Q86U70 411 aaPredicted RBP14.49□□□□□ -0.09
CLRN1-203ENST00000328863 TMEM135Q86UB9 458 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 FBXO39Q8N4B4 442 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.49□□□□□ -0.09
CLRN1-203ENST00000328863 CALML6Q8TD86 181 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 NCSTNQ92542 709 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 ZNF578Q96N58 590 aaPredicted RBP14.49□□□□□ -0.09
CLRN1-203ENST00000328863 TCF12Q99081 682 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 FAM167BQ9BTA0 163 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 TRIM31Q9BZY9 425 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 SEMA6CQ9H3T2 930 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 ZMIZ1Q9ULJ6 1067 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 CFAP20Q9Y6A4 193 aaKnown RBP14.49□□□□□ -0.09
CLRN1-203ENST00000328863 ACACAQ13085 2346 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 ADAMTS20P59510 1910 aa14.49□□□□□ -0.09
CLRN1-203ENST00000328863 H3BMM5 538 aa14.48□□□□□ -0.09
CLRN1-203ENST00000328863 APOA4P06727 396 aa14.48□□□□□ -0.09
CLRN1-203ENST00000328863 CSTF2P33240 577 aaKnown RBP eCLIP14.48□□□□□ -0.09
CLRN1-203ENST00000328863 PREPP48147 710 aa14.48□□□□□ -0.09
CLRN1-203ENST00000328863 ITGA8P53708 1063 aa14.48□□□□□ -0.09
CLRN1-203ENST00000328863 ARL4CP56559 192 aa14.48□□□□□ -0.09
CLRN1-203ENST00000328863 PCBP4P57723 403 aaKnown RBP14.48□□□□□ -0.09
CLRN1-203ENST00000328863 ERVPABLB-1P60509 514 aa14.48□□□□□ -0.09
CLRN1-203ENST00000328863 DHX9Q08211 1270 aaKnown RBP14.48□□□□□ -0.09
CLRN1-203ENST00000328863 CALCOCO2Q13137 446 aa14.48□□□□□ -0.09
CLRN1-203ENST00000328863 CRYMQ14894 314 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms