RNA–Protein interactions for RNA: ENST00000320876.10

SMCHD1-201, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMCHD1, Length 8,821 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-201ENST00000320876 FSTL1Q12841 308 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 KHDC1Q4VXA5 237 aaKnown RBP16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 C6orf183Q5T699 404 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 THAP6Q8TBB0 222 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 FARSBQ9NSD9 589 aaKnown RBP16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 SEC14L4Q9UDX3 406 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 FAM237AA0A1B0GTK4 181 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 PQBP1O60828 265 aaKnown RBP16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 TACSTD2P09758 323 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 ITPKAP23677 461 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 KHKP50053 298 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 MAPK12P53778 367 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 CD83Q01151 205 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 CLEC6AQ6EIG7 209 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 RAB12Q6IQ22 244 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 XAGE5Q8WWM1 108 aa16.67■□□□□ 0.26
SMCHD1-201ENST00000320876 RIC1Q4ADV7 1423 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 RBM47A0AV96 593 aaKnown RBP16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 L7N2F9 121 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 PRAMEF12O95522 483 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 ADH1CP00326 375 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 VAMP2P63027 116 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 GXYLT1Q4G148 440 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 ATP13A4Q4VNC1 1196 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 GRHL2Q6ISB3 625 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 RHBDF2Q6PJF5 856 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 UBE2J2Q8N2K1 259 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 KCNMB3Q9NPA1 279 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 PSMD9O00233 223 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 CXCR6O00574 342 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 SMARCB1Q12824 385 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 KLHL36Q8N4N3 616 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 P2RY11Q96G91 374 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 EME2A4GXA9 379 aaPredicted RBP16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 PET100P0DJ07 73 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 PVALBP20472 110 aaPredicted RBP16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 ADGRA1Q86SQ6 560 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 ZDHHC21Q8IVQ6 265 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 C5orf34Q96MH7 638 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 CTPS1P17812 591 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 ICAM3P32942 547 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 IDH3AP50213 366 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 MAXP61244 160 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 XKRXQ6PP77 449 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 SOCS4Q8WXH5 440 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 KCTD15Q96SI1 283 aaPredicted RBP16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 ACO2Q99798 780 aaKnown RBP16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 KXD1Q9BQD3 176 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 I3L521 148 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 SLC33A1O00400 549 aaPredicted RBP16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 CCRL2O00421 344 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 ACOX3O15254 700 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 PNLIPRP1P54315 467 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 KCNK18Q7Z418 384 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 NUDT15Q9NV35 164 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 ANKRD63C9JTQ0 380 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 PGLSO95336 258 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 IL1R1P14778 569 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 SH3RF1Q7Z6J0 888 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 PARGQ86W56 976 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 RNF38Q9H0F5 515 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 GLYATL1P3A0A0U1RQE8 302 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 ITGB1P05556 798 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 SLC7A1P30825 629 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 SF1Q15637 639 aaKnown RBP16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 ZBED5Q49AG3 693 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 RIOX2Q8IUF8 465 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 INPP4AQ96PE3 977 aaPredicted RBP16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 COMMD3Q9UBI1 195 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 FETUBQ9UGM5 382 aa16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 REXO2Q9Y3B8 237 aaKnown RBP16.66■□□□□ 0.26
SMCHD1-201ENST00000320876 CYP3A7-CYP3A51PA0A087WV96 503 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 FAM149AA5PLN7 773 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 CD36P16671 472 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 CYP3A7P24462 503 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 OR3A3P47888 321 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 OR3A2P47893 321 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 CDH13P55290 713 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 EARS2Q5JPH6 523 aaKnown RBP16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 LIX1Q8N485 282 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 GAD1Q99259 594 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 B3GNT4Q9C0J1 378 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 GRIN3BO60391 1043 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 RP2O75695 350 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 SRCP12931 536 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 DCKP27707 260 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 ARL13AQ5H913 290 aaPredicted RBP16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 IL23RQ5VWK5 629 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 CPNE9Q8IYJ1 553 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 OR10A6Q8NH74 314 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 HIPK3Q9H422 1215 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 PAGE1O75459 146 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 AP2A1O95782 977 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 ADORA2AP29274 412 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 SLC15A1P46059 708 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 PSEN2P49810 448 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 WNT3AP56704 352 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 TAS2R40P59535 323 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 VLDLRP98155 873 aa16.65■□□□□ 0.26
SMCHD1-201ENST00000320876 ZNF627Q7L945 461 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms