RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 HIC2Q96JB3 615 aa24.67■■□□□ 1.54
ROM1-201ENST00000278833 PPP3R2Q96LZ3 170 aa24.67■■□□□ 1.54
ROM1-201ENST00000278833 YTHDF1Q9BYJ9 559 aaKnown RBP24.67■■□□□ 1.54
ROM1-201ENST00000278833 GPR63Q9BZJ6 419 aa24.67■■□□□ 1.54
ROM1-201ENST00000278833 ACTL8Q9H568 366 aa24.67■■□□□ 1.54
ROM1-201ENST00000278833 CAAP1Q9H8G2 361 aa24.67■■□□□ 1.54
ROM1-201ENST00000278833 RSL24D1Q9UHA3 163 aaKnown RBP24.67■■□□□ 1.54
ROM1-201ENST00000278833 VPS51Q9UID3 782 aa24.67■■□□□ 1.54
ROM1-201ENST00000278833 FFAR2O15552 330 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 TSPAN3O60637 253 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 CDH1P12830 882 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 PLOD1Q02809 727 aaPredicted RBP24.66■■□□□ 1.54
ROM1-201ENST00000278833 LYSMD3Q7Z3D4 306 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 SNX20Q7Z614 316 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 METTL6Q8TCB7 284 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 CLSTN3Q9BQT9 956 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 C1orf50Q9BV19 199 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 CLPBQ9H078 707 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 INTS7Q9NVH2 962 aaKnown RBP24.66■■□□□ 1.54
ROM1-201ENST00000278833 OAZ3Q9UMX2 235 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 CCL27Q9Y4X3 112 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 MICAL3Q7RTP6 2002 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 CXorf51AA0A1B0GTR3 108 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 SOCS5O75159 536 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 PRSS23O95084 383 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 OLFM2O95897 454 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 CXCL10P02778 98 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 MZF1P28698 734 aaPredicted RBP24.66■■□□□ 1.54
ROM1-201ENST00000278833 KIAA0040Q15053 153 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 CYP20A1Q6UW02 462 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 ISLR2Q6UXK2 745 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 LINGO4Q6UY18 593 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 Q6ZNB5 142 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 OR4F6Q8NGB9 312 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 RPF2Q9H7B2 306 aaKnown RBP24.66■■□□□ 1.54
ROM1-201ENST00000278833 KLHL42Q9P2K6 505 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 PCDHB9Q9Y5E1 797 aa24.66■■□□□ 1.54
ROM1-201ENST00000278833 LAMA2P24043 3122 aaKnown RBP24.65■■□□□ 1.54
ROM1-201ENST00000278833 GREM1O60565 184 aa24.65■■□□□ 1.54
ROM1-201ENST00000278833 TBL1XO60907 577 aa24.65■■□□□ 1.54
ROM1-201ENST00000278833 LDLRP01130 860 aa24.65■■□□□ 1.54
ROM1-201ENST00000278833 SLC5A2P31639 672 aa24.65■■□□□ 1.54
ROM1-201ENST00000278833 HTR6P50406 440 aa24.65■■□□□ 1.54
ROM1-201ENST00000278833 TWF1Q12792 350 aa24.65■■□□□ 1.54
ROM1-201ENST00000278833 MAD2L1Q13257 205 aaPredicted RBP24.65■■□□□ 1.54
ROM1-201ENST00000278833 PWP1Q13610 501 aa24.65■■□□□ 1.54
ROM1-201ENST00000278833 TTC23LQ6PF05 361 aa24.65■■□□□ 1.54
ROM1-201ENST00000278833 USP51Q70EK9 711 aa24.65■■□□□ 1.54
ROM1-201ENST00000278833 RIMKLAQ8IXN7 391 aa24.65■■□□□ 1.54
ROM1-201ENST00000278833 CBARPQ8N350 705 aaPredicted RBP24.65■■□□□ 1.54
ROM1-201ENST00000278833 RDH14Q9HBH5 336 aa24.65■■□□□ 1.54
ROM1-201ENST00000278833 LATS2Q9NRM7 1088 aa24.65■■□□□ 1.54
ROM1-201ENST00000278833 SMPD3Q9NY59 655 aaPredicted RBP24.65■■□□□ 1.54
ROM1-201ENST00000278833 NEUROG3Q9Y4Z2 214 aa24.65■■□□□ 1.54
ROM1-201ENST00000278833 H0Y626 953 aa24.64■■□□□ 1.54
ROM1-201ENST00000278833 ARHGEF15O94989 841 aa24.64■■□□□ 1.54
ROM1-201ENST00000278833 SPATA31D3P0C874 917 aa24.64■■□□□ 1.54
ROM1-201ENST00000278833 IRF1P10914 325 aa24.64■■□□□ 1.54
ROM1-201ENST00000278833 MTHFD1P11586 935 aaKnown RBP24.64■■□□□ 1.54
ROM1-201ENST00000278833 UGT1A6P19224 532 aa24.64■■□□□ 1.54
ROM1-201ENST00000278833 CAPGP40121 348 aa24.64■■□□□ 1.54
ROM1-201ENST00000278833 PTPN5P54829 565 aa24.64■■□□□ 1.54
ROM1-201ENST00000278833 VEPH1Q14D04 833 aa24.64■■□□□ 1.54
ROM1-201ENST00000278833 MACC1Q6ZN28 852 aa24.64■■□□□ 1.54
ROM1-201ENST00000278833 SPATA31D4Q6ZUB0 917 aa24.64■■□□□ 1.54
ROM1-201ENST00000278833 METTL3Q86U44 580 aaKnown RBP24.64■■□□□ 1.54
ROM1-201ENST00000278833 SERPINA9Q86WD7 417 aa24.64■■□□□ 1.54
ROM1-201ENST00000278833 OR52E4Q8NGH9 312 aa24.64■■□□□ 1.54
ROM1-201ENST00000278833 IGSF21Q96ID5 467 aa24.64■■□□□ 1.54
ROM1-201ENST00000278833 FAM126AQ9BYI3 521 aaPredicted RBP24.64■■□□□ 1.54
ROM1-201ENST00000278833 AP3M1Q9Y2T2 418 aa24.64■■□□□ 1.54
ROM1-201ENST00000278833 TET1Q8NFU7 2136 aa24.64■■□□□ 1.53
ROM1-201ENST00000278833 LTBP2Q14767 1821 aa24.64■■□□□ 1.53
ROM1-201ENST00000278833 C2orf78A6NCI8 922 aa24.64■■□□□ 1.53
ROM1-201ENST00000278833 H0YAE9 185 aa24.64■■□□□ 1.53
ROM1-201ENST00000278833 CSF2RAP15509 400 aa24.64■■□□□ 1.53
ROM1-201ENST00000278833 RPL17P18621 184 aaKnown RBP24.64■■□□□ 1.53
ROM1-201ENST00000278833 ITGALP20701 1170 aa24.64■■□□□ 1.53
ROM1-201ENST00000278833 DGKAP23743 735 aa24.64■■□□□ 1.53
ROM1-201ENST00000278833 PLD1Q13393 1074 aa24.64■■□□□ 1.53
ROM1-201ENST00000278833 CDKN3Q16667 212 aa24.64■■□□□ 1.53
ROM1-201ENST00000278833 CDKL4Q5MAI5 379 aa24.64■■□□□ 1.53
ROM1-201ENST00000278833 PTRHD1Q6GMV3 140 aaKnown RBP24.64■■□□□ 1.53
ROM1-201ENST00000278833 IL27RAQ6UWB1 636 aa24.64■■□□□ 1.53
ROM1-201ENST00000278833 SCIMPQ6UWF3 145 aa24.64■■□□□ 1.53
ROM1-201ENST00000278833 ERI1Q8IV48 349 aaKnown RBP24.64■■□□□ 1.53
ROM1-201ENST00000278833 ESAMQ96AP7 390 aa24.64■■□□□ 1.53
ROM1-201ENST00000278833 BIRC7Q96CA5 298 aa24.64■■□□□ 1.53
ROM1-201ENST00000278833 NSMCE2Q96MF7 247 aa24.64■■□□□ 1.53
ROM1-201ENST00000278833 CGREF1Q99674 301 aa24.64■■□□□ 1.53
ROM1-201ENST00000278833 TRPS1Q9UHF7 1281 aa24.64■■□□□ 1.53
ROM1-201ENST00000278833 LAMA3Q16787 3333 aa24.63■■□□□ 1.53
ROM1-201ENST00000278833 RNF103-CHMP3A0A140T963 221 aa24.63■■□□□ 1.53
ROM1-201ENST00000278833 CCDC160A6NGH7 325 aa24.63■■□□□ 1.53
ROM1-201ENST00000278833 PRAMEF1O95521 474 aa24.63■■□□□ 1.53
ROM1-201ENST00000278833 PRAMEF12O95522 483 aa24.63■■□□□ 1.53
ROM1-201ENST00000278833 TRBC1P01850 177 aa24.63■■□□□ 1.53
ROM1-201ENST00000278833 VARSP26640 1264 aaKnown RBP24.63■■□□□ 1.53
ROM1-201ENST00000278833 ALDH7A1P49419 539 aaKnown RBP24.63■■□□□ 1.53
ROM1-201ENST00000278833 GPR33Q49SQ1 333 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms