RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 SLC45A1Q9Y2W3 748 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 V9GYQ6 96 aa9.1□□□□□ -0.95
PDGFC-201ENST00000274071 TNS1Q9HBL0 1735 aaKnown RBP9.09□□□□□ -0.95
PDGFC-201ENST00000274071 IGKV6D-41A0A0C4DH26 115 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 hCG_1984214I3L0E3 225 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 APOC4-APOC2K7ER74 178 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 FADS2O95864 444 aaKnown RBP9.09□□□□□ -0.95
PDGFC-201ENST00000274071 APOC2P02655 101 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 FCGRTP55899 365 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 HYAL2Q12891 473 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 SEMA5AQ13591 1074 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 PTPRRQ15256 657 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 TRIP4Q15650 581 aaPredicted RBP9.09□□□□□ -0.95
PDGFC-201ENST00000274071 ALG1LQ6GMV1 187 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 SMYD5Q6GMV2 418 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 NPNTQ6UXI9 565 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 CYS1Q717R9 158 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 ZNF534Q76KX8 674 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 MRPL10Q7Z7H8 261 aaKnown RBP9.09□□□□□ -0.95
PDGFC-201ENST00000274071 DPP9Q86TI2 863 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 PHF13Q86YI8 300 aaPredicted RBP9.09□□□□□ -0.95
PDGFC-201ENST00000274071 RDH10Q8IZV5 341 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 ZNF555Q8NEP9 628 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 PHOSPHO2Q8TCD6 241 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 TMBIM1Q969X1 311 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 PYCR2Q96C36 320 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 ZNF668Q96K58 619 aaPredicted RBP9.09□□□□□ -0.95
PDGFC-201ENST00000274071 FAM129BQ96TA1 746 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 PI4K2AQ9BTU6 479 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 MRIQ9BWK5 157 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 TTLL2Q9BWV7 592 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 TRIM8Q9BZR9 551 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 ESRP2Q9H6T0 727 aaKnown RBP9.09□□□□□ -0.95
PDGFC-201ENST00000274071 ACOT13Q9NPJ3 140 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 CMTM6Q9NX76 183 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 MAP10Q9P2G4 905 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 ZFC3H1O60293 1989 aaKnown RBP9.09□□□□□ -0.95
PDGFC-201ENST00000274071 SCN9AQ15858 1988 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 MICAL3Q7RTP6 2002 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 H2AFYO75367 372 aaKnown RBP9.09□□□□□ -0.95
PDGFC-201ENST00000274071 NCK1P16333 377 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 RPS3P23396 243 aaKnown RBP eCLIP9.09□□□□□ -0.95
PDGFC-201ENST00000274071 KDELR1P24390 212 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 MAGEA3P43357 314 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 SLC35A2P78381 396 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 IRF9Q00978 393 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 ROR1Q01973 937 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 ZNF91Q05481 1191 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 CDH17Q12864 832 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 KCNAB2Q13303 367 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 ANKRD34AQ69YU3 496 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 GPRIN3Q6ZVF9 776 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 TRILQ7L0X0 811 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 C3orf58Q8NDZ4 430 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 AGBL3Q8NEM8 1001 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 OR7G3Q8NG95 312 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 OR52N1Q8NH53 320 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 RDH11Q8TC12 318 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 SPPL2BQ8TCT7 592 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 FUBP1Q96AE4 644 aaKnown RBP9.09□□□□□ -0.95
PDGFC-201ENST00000274071 RNF145Q96MT1 663 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 GPR137Q96N19 417 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 SLC30A2Q9BRI3 323 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 C1QTNF6Q9BXI9 259 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 DUSP21Q9H596 190 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 RNF167Q9H6Y7 350 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 NMRAL1Q9HBL8 299 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 SLC9A2Q9UBY0 812 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 ACSL5Q9ULC5 683 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 STAP1Q9ULZ2 295 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 COQ4Q9Y3A0 265 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 MTF2Q9Y483 593 aaPredicted RBP9.09□□□□□ -0.95
PDGFC-201ENST00000274071 SCN4AP35499 1836 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 A0A1W2PP18 115 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 FAM86B1E9PN63 330 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 KHNYNO15037 678 aaKnown RBP9.09□□□□□ -0.95
PDGFC-201ENST00000274071 NOBOXO60393 691 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 CELF2O95319 508 aaKnown RBP9.09□□□□□ -0.95
PDGFC-201ENST00000274071 ECDO95905 644 aaPredicted RBP9.09□□□□□ -0.95
PDGFC-201ENST00000274071 LCKP06239 509 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 RPS17P08708 135 aaKnown RBP9.09□□□□□ -0.95
PDGFC-201ENST00000274071 CPB1P15086 417 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 CA5AP35218 305 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 LIPAP38571 399 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 CSKP41240 450 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 FKBP1AP62942 108 aaKnown RBP9.09□□□□□ -0.95
PDGFC-201ENST00000274071 RBP5P82980 135 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 TAB1Q15750 504 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 ASPRV1Q53RT3 343 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 ZMAT1Q5H9K5 638 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 MPP7Q5T2T1 576 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 IFNEQ86WN2 208 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 RFX6Q8HWS3 928 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 VWA5B2Q8N398 1253 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 EMC1Q8N766 993 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 TTLL6Q8N841 843 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 XXYLT1Q8NBI6 393 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 OR6P1Q8NGX9 317 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 SLC5A11Q8WWX8 675 aa9.09□□□□□ -0.95
PDGFC-201ENST00000274071 ROPN1LQ96C74 230 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms