RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 FAM129AQ9BZQ8 928 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 COG4Q9H9E3 785 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 INTS10Q9NVR2 710 aaKnown RBP17.99■□□□□ 0.47
SDF4-201ENST00000263741 DLL3Q9NYJ7 618 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 ZFATQ9P243 1243 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 GNPTGQ9UJJ9 305 aa17.99■□□□□ 0.47
SDF4-201ENST00000263741 TSR3Q9UJK0 312 aaKnown RBP17.99■□□□□ 0.47
SDF4-201ENST00000263741 CFAP20Q9Y6A4 193 aaKnown RBP17.99■□□□□ 0.47
SDF4-201ENST00000263741 ANKRD12Q6UB98 2062 aa17.98■□□□□ 0.47
SDF4-201ENST00000263741 PRAMEF33A0A0G2JMD5 474 aa17.98■□□□□ 0.47
SDF4-201ENST00000263741 CPED1A4D0V7 1026 aa17.98■□□□□ 0.47
SDF4-201ENST00000263741 VCLP18206 1134 aa17.98■□□□□ 0.47
SDF4-201ENST00000263741 CLCNKAP51800 687 aa17.98■□□□□ 0.47
SDF4-201ENST00000263741 DMPKQ09013 629 aa17.98■□□□□ 0.47
SDF4-201ENST00000263741 MGAT5Q09328 741 aa17.98■□□□□ 0.47
SDF4-201ENST00000263741 TRIP6Q15654 476 aaKnown RBP17.98■□□□□ 0.47
SDF4-201ENST00000263741 TUBB8Q3ZCM7 444 aa17.98■□□□□ 0.47
SDF4-201ENST00000263741 ZNF658BQ4V348 819 aaPredicted RBP17.98■□□□□ 0.47
SDF4-201ENST00000263741 DUS1LQ6P1R4 473 aaKnown RBP17.98■□□□□ 0.47
SDF4-201ENST00000263741 ZNF761Q86XN6 746 aaPredicted RBP17.98■□□□□ 0.47
SDF4-201ENST00000263741 CNTN4Q8IWV2 1026 aa17.98■□□□□ 0.47
SDF4-201ENST00000263741 SDR16C5Q8N3Y7 309 aa17.98■□□□□ 0.47
SDF4-201ENST00000263741 GPR156Q8NFN8 814 aa17.98■□□□□ 0.47
SDF4-201ENST00000263741 HM13Q8TCT9 377 aa17.98■□□□□ 0.47
SDF4-201ENST00000263741 TCF12Q99081 682 aa17.98■□□□□ 0.47
SDF4-201ENST00000263741 RTKNQ9BST9 563 aa17.98■□□□□ 0.47
SDF4-201ENST00000263741 SLC32A1Q9H598 525 aa17.98■□□□□ 0.47
SDF4-201ENST00000263741 SARS2Q9NP81 518 aaKnown RBP17.98■□□□□ 0.47
SDF4-201ENST00000263741 GALPQ9UBC7 116 aa17.98■□□□□ 0.47
SDF4-201ENST00000263741 RRP15Q9Y3B9 282 aaKnown RBP17.98■□□□□ 0.47
SDF4-201ENST00000263741 ACSL3O95573 720 aa17.97■□□□□ 0.47
SDF4-201ENST00000263741 FTH1P02794 183 aa17.97■□□□□ 0.47
SDF4-201ENST00000263741 F3P13726 295 aa17.97■□□□□ 0.47
SDF4-201ENST00000263741 PDHA2P29803 388 aa17.97■□□□□ 0.47
SDF4-201ENST00000263741 PGGT1BP53609 377 aa17.97■□□□□ 0.47
SDF4-201ENST00000263741 RBM20Q5T481 1227 aaKnown RBP17.97■□□□□ 0.47
SDF4-201ENST00000263741 FBF1Q8TES7 1133 aa17.97■□□□□ 0.47
SDF4-201ENST00000263741 WWP1Q9H0M0 922 aa17.97■□□□□ 0.47
SDF4-201ENST00000263741 C1QAP02745 245 aa17.97■□□□□ 0.47
SDF4-201ENST00000263741 CSRP1P21291 193 aaKnown RBP17.97■□□□□ 0.47
SDF4-201ENST00000263741 IDSP22304 550 aa17.97■□□□□ 0.47
SDF4-201ENST00000263741 RPS3P23396 243 aaKnown RBP eCLIP17.97■□□□□ 0.479e-8■■■■□ 26.7
SDF4-201ENST00000263741 CCR7P32248 378 aa17.97■□□□□ 0.47
SDF4-201ENST00000263741 SIM1P81133 766 aaPredicted RBP17.97■□□□□ 0.47
SDF4-201ENST00000263741 CLCA4Q14CN2 919 aa17.97■□□□□ 0.47
SDF4-201ENST00000263741 NR0B2Q15466 257 aa17.97■□□□□ 0.47
SDF4-201ENST00000263741 C14orf28Q4W4Y0 310 aa17.97■□□□□ 0.47
SDF4-201ENST00000263741 FAM181AQ8N9Y4 354 aa17.97■□□□□ 0.47
SDF4-201ENST00000263741 UHMK1Q8TAS1 419 aaKnown RBP17.97■□□□□ 0.47
SDF4-201ENST00000263741 TOR4AQ9NXH8 423 aa17.97■□□□□ 0.47
SDF4-201ENST00000263741 RABGEF1Q9UJ41 708 aa17.97■□□□□ 0.47
SDF4-201ENST00000263741 DNMT3AQ9Y6K1 912 aaPredicted RBP17.97■□□□□ 0.47
SDF4-201ENST00000263741 AGPSO00116 658 aa17.96■□□□□ 0.47
SDF4-201ENST00000263741 KCNK5O95279 499 aa17.96■□□□□ 0.47
SDF4-201ENST00000263741 AHSGP02765 367 aa17.96■□□□□ 0.47
SDF4-201ENST00000263741 PKMP14618 531 aaKnown RBP17.96■□□□□ 0.47
SDF4-201ENST00000263741 FRG1Q14331 258 aaKnown RBP17.96■□□□□ 0.47
SDF4-201ENST00000263741 SYTL3Q4VX76 610 aa17.96■□□□□ 0.47
SDF4-201ENST00000263741 PERM1Q5SV97 790 aa17.96■□□□□ 0.47
SDF4-201ENST00000263741 METRNLQ641Q3 311 aa17.96■□□□□ 0.47
SDF4-201ENST00000263741 OGFOD3Q6PK18 319 aa17.96■□□□□ 0.47
SDF4-201ENST00000263741 EFL1Q7Z2Z2 1120 aaKnown RBP17.96■□□□□ 0.47
SDF4-201ENST00000263741 LMNTD2Q8IXW0 634 aa17.96■□□□□ 0.47
SDF4-201ENST00000263741 ZBTB9Q96C00 473 aa17.96■□□□□ 0.47
SDF4-201ENST00000263741 RMDN2Q96LZ7 410 aa17.96■□□□□ 0.47
SDF4-201ENST00000263741 CDC6Q99741 560 aa17.96■□□□□ 0.47
SDF4-201ENST00000263741 PADI4Q9UM07 663 aa17.96■□□□□ 0.47
SDF4-201ENST00000263741 RNF215Q9Y6U7 377 aa17.96■□□□□ 0.47
SDF4-201ENST00000263741 COL27A1Q8IZC6 1860 aaPredicted RBP17.96■□□□□ 0.47
SDF4-201ENST00000263741 PTPRBP23467 1997 aa17.96■□□□□ 0.47
SDF4-201ENST00000263741 PFDN6O15212 129 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 SHOX2O60902 331 aaPredicted RBP17.95■□□□□ 0.46
SDF4-201ENST00000263741 CKMT1AP12532 417 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 LEPRP48357 1165 aaKnown RBP17.95■□□□□ 0.46
SDF4-201ENST00000263741 ACADVLP49748 655 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 KBTBD12Q3ZCT8 623 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 VRK3Q8IV63 474 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 SFRP1Q8N474 314 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 ARL14Q8N4G2 192 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 CCDC74AQ96AQ1 378 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 MRRFQ96E11 262 aaKnown RBP17.95■□□□□ 0.46
SDF4-201ENST00000263741 SLC30A3Q99726 388 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 SH3GL2Q99962 352 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 FAM107BQ9H098 131 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 RASSF4Q9H2L5 321 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 ZNF624Q9P2J8 865 aaPredicted RBP17.95■□□□□ 0.46
SDF4-201ENST00000263741 MED16Q9Y2X0 877 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 PCDHB1Q9Y5F3 818 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 MYO1CO00159 1063 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 QSOX1O00391 747 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 TNFSF14O43557 240 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 ESR1P03372 595 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 SLC35G4P0C7Q5 338 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 CKMT2P17540 419 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 CLDN6P56747 220 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 HSPA14Q0VDF9 509 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 IYDQ6PHW0 289 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 STRA8Q7Z7C7 330 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 LRRC6Q86X45 466 aa17.95■□□□□ 0.46
SDF4-201ENST00000263741 CTAGE3PQ8IX95 158 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms