RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 PLA2G2CQ5R387 149 aa15.51■□□□□ 0.07
CCDC90B-201ENST00000260054 RAPH1Q70E73 1250 aa15.51■□□□□ 0.07
CCDC90B-201ENST00000260054 NRROSQ86YC3 692 aa15.51■□□□□ 0.07
CCDC90B-201ENST00000260054 VRK3Q8IV63 474 aa15.51■□□□□ 0.07
CCDC90B-201ENST00000260054 CPNE9Q8IYJ1 553 aa15.51■□□□□ 0.07
CCDC90B-201ENST00000260054 ANKRD49Q8WVL7 239 aa15.51■□□□□ 0.07
CCDC90B-201ENST00000260054 INPP5DQ92835 1189 aa15.51■□□□□ 0.07
CCDC90B-201ENST00000260054 PGM2Q96G03 612 aa15.51■□□□□ 0.07
CCDC90B-201ENST00000260054 ELF4Q99607 663 aaPredicted RBP15.51■□□□□ 0.07
CCDC90B-201ENST00000260054 SLC13A1Q9BZW2 595 aa15.51■□□□□ 0.07
CCDC90B-201ENST00000260054 IRF2BPLQ9H1B7 796 aa15.51■□□□□ 0.07
CCDC90B-201ENST00000260054 OGFRQ9NZT2 677 aa15.51■□□□□ 0.07
CCDC90B-201ENST00000260054 KLHL42Q9P2K6 505 aa15.51■□□□□ 0.07
CCDC90B-201ENST00000260054 A0A096LPK6 155 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 KLHL33A6NCF5 533 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 GOLGA8RI6L899 631 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 LIN7AO14910 233 aaPredicted RBP15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 KPNA5O15131 536 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 MT-ND3P03897 115 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 APOA4P06727 396 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 RETP07949 1114 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 CRABP2P29373 138 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 PDHA2P29803 388 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 IRX4P78413 519 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 SYTL3Q4VX76 610 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 ACSBG2Q5FVE4 666 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 PRRT3Q5FWE3 981 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 PLEKHS1Q5SXH7 462 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 TCEAL6Q6IPX3 200 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 TRABD2AQ86V40 505 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 CNPY4Q8N129 248 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 GPBAR1Q8TDU6 330 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 ASZ1Q8WWH4 475 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 TCEAL3Q969E4 200 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 SH3GL2Q99962 352 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 OSGEPL1Q9H4B0 414 aa15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.5■□□□□ 0.07
CCDC90B-201ENST00000260054 PCDH15Q96QU1 1955 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 TDRD6O60522 2096 aaKnown RBP15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 GOLGA6L10A6NI86 522 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 SDC3O75056 442 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 SLCO2B1O94956 709 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 TSPAN12O95859 305 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 CTSEP14091 401 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 VCLP18206 1134 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 HNRNPKP61978 463 aaKnown RBP eCLIP15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 IRF9Q00978 393 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 ILF3Q12906 894 aaKnown RBP eCLIP15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 SHBQ15464 509 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 ZNF423Q2M1K9 1284 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 HLA-BQ31612 363 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 TTLL9Q3SXZ7 439 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 METRNLQ641Q3 311 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 SLC30A9Q6PML9 568 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 SH2D5Q6ZV89 423 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 SRRM1Q8IYB3 904 aaKnown RBP15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 EEF1AKMT1Q8WVE0 214 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 TMEM159Q96B96 161 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 ARL8AQ96BM9 186 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 VPS11Q9H270 941 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 PCMTD2Q9NV79 361 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 TSR3Q9UJK0 312 aaKnown RBP15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 TMEM131Q92545 1883 aa15.49■□□□□ 0.07
CCDC90B-201ENST00000260054 H3BM21 787 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 ARHGAP33O14559 1287 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 ATP8B1O43520 1251 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 KCNJ13O60928 360 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 PIAS2O75928 621 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 PYGBP11216 843 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 RPL10P27635 214 aaKnown RBP15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 ACTR1BP42025 376 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 RXRGP48443 463 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 CLCNKAP51800 687 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 ACTR1AP61163 376 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 SEPT7Q16181 437 aaKnown RBP15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 TAF1BQ53T94 588 aaPredicted RBP15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 SPATA6LQ8N4H0 392 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 ZNF548Q8NEK5 533 aaPredicted RBP15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 OR2I1PQ8NGU4 316 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 LMX1AQ8TE12 382 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 GLMNQ92990 594 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 LINGO1Q96FE5 620 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 UBXN10Q96LJ8 280 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 NUSAP1Q9BXS6 441 aaKnown RBP15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 GSDMCQ9BYG8 508 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 UNKQ9C0B0 810 aaKnown RBP15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 IL21RQ9HBE5 538 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 SYTL2Q9HCH5 934 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 TBC1D29Q9UFV1 150 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 TLK1Q9UKI8 766 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 ACOT9Q9Y305 439 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 A0A1B0GTQ1 180 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 KHNYNO15037 678 aaKnown RBP15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 EML2O95834 649 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 TOP3BO95985 862 aaKnown RBP15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 MPOP05164 745 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 CCDC166P0CW27 439 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 KRT4P19013 534 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 DGKAP23743 735 aa15.48■□□□□ 0.07
CCDC90B-201ENST00000260054 CCNFP41002 786 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms