RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 HECTD3Q5T447 861 aa15□□□□□ -0.01
DDX56-201ENST00000258772 TMEM26Q6ZUK4 368 aa15□□□□□ -0.01
DDX56-201ENST00000258772 TAS1R1Q7RTX1 841 aa15□□□□□ -0.01
DDX56-201ENST00000258772 OR8J3Q8NGG0 315 aa15□□□□□ -0.01
DDX56-201ENST00000258772 HSPBAP1Q96EW2 488 aa15□□□□□ -0.01
DDX56-201ENST00000258772 CASD1Q96PB1 797 aa15□□□□□ -0.01
DDX56-201ENST00000258772 CWH43Q9H720 699 aa15□□□□□ -0.01
DDX56-201ENST00000258772 VAPAQ9P0L0 249 aa15□□□□□ -0.01
DDX56-201ENST00000258772 ZMYM5Q9UJ78 669 aa15□□□□□ -0.01
DDX56-201ENST00000258772 PKP3Q9Y446 797 aa15□□□□□ -0.01
DDX56-201ENST00000258772 CCL27Q9Y4X3 112 aa15□□□□□ -0.01
DDX56-201ENST00000258772 SLC30A1Q9Y6M5 507 aa15□□□□□ -0.01
DDX56-201ENST00000258772 ZNF840PA6NDX5 716 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 OTCP00480 354 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 S100BP04271 92 aaPredicted RBP14.99□□□□□ -0.01
DDX56-201ENST00000258772 ALPLP05186 524 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 TCF3P15923 654 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 NFKBIAP25963 317 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 HMOX2P30519 316 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 TWF1Q12792 350 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 DAG1Q14118 895 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 NEDD8Q15843 81 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 PLA2G4EQ3MJ16 856 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 ADGRF1Q5T601 910 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 CXorf57Q6NSI4 855 aaKnown RBP14.99□□□□□ -0.01
DDX56-201ENST00000258772 ELMSAN1Q6PJG2 1045 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 PRSS55Q6UWB4 352 aaPredicted RBP14.99□□□□□ -0.01
DDX56-201ENST00000258772 ITIH5Q86UX2 942 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 AADATQ8N5Z0 425 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 TERB1Q8NA31 727 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 PDPRQ8NCN5 879 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 FNDC8Q8TC99 324 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 PLD4Q96BZ4 506 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 NSUN3Q9H649 340 aaKnown RBP14.99□□□□□ -0.01
DDX56-201ENST00000258772 PCDHB9Q9Y5E1 797 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 PCDHB1Q9Y5F3 818 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 MAGED1Q9Y5V3 778 aaPredicted RBP14.99□□□□□ -0.01
DDX56-201ENST00000258772 RAD51BO15315 384 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 DFNA5O60443 496 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 GMNNO75496 209 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 KCNH1O95259 989 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 SLC2A4P14672 509 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 ELK4P28324 431 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 HMGCLP35914 325 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 POLR2IP36954 125 aaKnown RBP14.99□□□□□ -0.01
DDX56-201ENST00000258772 HSPA7P48741 367 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 TMED1Q13445 227 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 ANKS3Q6ZW76 656 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 STK32CQ86UX6 486 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 EGFL6Q8IUX8 553 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 CCDC97Q96F63 343 aaPredicted RBP14.99□□□□□ -0.01
DDX56-201ENST00000258772 PPP3R2Q96LZ3 170 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 TUBA1CQ9BQE3 449 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 GPR63Q9BZJ6 419 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 CIPCQ9C0C6 399 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 NAA50Q9GZZ1 169 aaKnown RBP14.99□□□□□ -0.01
DDX56-201ENST00000258772 GORASP2Q9H8Y8 452 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 SMPD4Q9NXE4 827 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 PLXNA4Q9HCM2 1894 aa14.99□□□□□ -0.01
DDX56-201ENST00000258772 TRIM64BA6NI03 449 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 GOLGA8CPA6NN73 597 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 TAPBPO15533 448 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 ADAM12O43184 909 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 B4GAT1O43505 415 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 FZD6O60353 706 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 GUCA1CO95843 209 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 THRBP10828 461 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 MTHFRP42898 656 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 GRSF1Q12849 480 aaKnown RBP eCLIP14.98□□□□□ -0.01
DDX56-201ENST00000258772 CBX2Q14781 532 aaPredicted RBP14.98□□□□□ -0.01
DDX56-201ENST00000258772 PTRHD1Q6GMV3 140 aaKnown RBP14.98□□□□□ -0.01
DDX56-201ENST00000258772 FAM117BQ6P1L5 589 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 CERS6Q6ZMG9 384 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 CLEC4FQ8N1N0 589 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 CHCHD4Q8N4Q1 142 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 THAP11Q96EK4 314 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 CNDP2Q96KP4 475 aaKnown RBP14.98□□□□□ -0.01
DDX56-201ENST00000258772 C17orf80Q9BSJ5 609 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 TTPALQ9BTX7 342 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 UGT2B28Q9BY64 529 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 ELOVL2Q9NXB9 296 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 LHX3Q9UBR4 397 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 ZNF711Q9Y462 761 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 PCDHB7Q9Y5E2 793 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 PIKFYVEQ9Y2I7 2098 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 A0A1W2PPW3 197 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 SH3PXD2BA1X283 911 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 FOXD2O60548 495 aaPredicted RBP14.98□□□□□ -0.01
DDX56-201ENST00000258772 CPNE6O95741 557 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 ELNP15502 786 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 MSH3P20585 1137 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 SHMT2P34897 504 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 RPL38P63173 70 aaKnown RBP14.98□□□□□ -0.01
DDX56-201ENST00000258772 PTGR1Q14914 329 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 C16orf72Q14CZ0 275 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 FGD3Q5JSP0 725 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 ZNF773Q6PK81 442 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 RNF180Q86T96 592 aa14.98□□□□□ -0.01
DDX56-201ENST00000258772 TMEM173Q86WV6 379 aaPredicted RBP14.98□□□□□ -0.01
DDX56-201ENST00000258772 PDZD8Q8NEN9 1154 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms