RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 ALOX12P18054 663 aa20.16■□□□□ 0.82
RARA-201ENST00000254066 UBA1P22314 1058 aaKnown RBP20.16■□□□□ 0.82
RARA-201ENST00000254066 FSHRP23945 695 aa20.16■□□□□ 0.82
RARA-201ENST00000254066 FOXA1P55317 472 aa20.16■□□□□ 0.82
RARA-201ENST00000254066 DGCR6Q14129 220 aa20.16■□□□□ 0.82
RARA-201ENST00000254066 YIF1BQ5BJH7 314 aa20.16■□□□□ 0.82
RARA-201ENST00000254066 OSTM1Q86WC4 334 aa20.16■□□□□ 0.82
RARA-201ENST00000254066 RALGPS2Q86X27 583 aaPredicted RBP20.16■□□□□ 0.82
RARA-201ENST00000254066 SLC47A1Q96FL8 570 aa20.16■□□□□ 0.82
RARA-201ENST00000254066 PDLIM5Q96HC4 596 aaKnown RBP20.16■□□□□ 0.82
RARA-201ENST00000254066 TEX37Q96LM6 180 aa20.16■□□□□ 0.82
RARA-201ENST00000254066 TMEM209Q96SK2 561 aa20.16■□□□□ 0.82
RARA-201ENST00000254066 SLAMF8Q9P0V8 285 aa20.16■□□□□ 0.82
RARA-201ENST00000254066 SGTAO43765 313 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 IL1RNP18510 177 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 GTF2E2P29084 291 aaKnown RBP20.15■□□□□ 0.82
RARA-201ENST00000254066 RACK1P63244 317 aaKnown RBP20.15■□□□□ 0.82
RARA-201ENST00000254066 CSNK2BP67870 215 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 PRKG2Q13237 762 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 NEK5Q6P3R8 708 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 DLEU7Q6UYE1 221 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 BEND7Q8N7W2 519 aaPredicted RBP20.15■□□□□ 0.82
RARA-201ENST00000254066 PTGR2Q8N8N7 351 aaPredicted RBP20.15■□□□□ 0.82
RARA-201ENST00000254066 LILRB1Q8NHL6 650 aaPredicted RBP20.15■□□□□ 0.82
RARA-201ENST00000254066 RHEBL1Q8TAI7 183 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 JPH3Q8WXH2 748 aaPredicted RBP20.15■□□□□ 0.82
RARA-201ENST00000254066 RPL3LQ92901 407 aaKnown RBP20.15■□□□□ 0.82
RARA-201ENST00000254066 SLC2A13Q96QE2 648 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 ZBED2Q9BTP6 218 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 PCDHB14Q9Y5E9 798 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 ZBTB42B2RXF5 422 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 FAM72CH0Y354 149 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 YES1P07947 543 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 HOXB8P17481 243 aaPredicted RBP20.15■□□□□ 0.82
RARA-201ENST00000254066 ADRA1AP35348 466 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 SOX11P35716 441 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 UFM1P61960 85 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 ERVK-8P63133 956 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 BNC1Q01954 994 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 FAM72AQ5TYM5 149 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 FAM72DQ6L9T8 149 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 FAM72BQ86X60 149 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 SULF1Q8IWU6 871 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 PLPP6Q8IY26 295 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 MICU2Q8IYU8 434 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 PSD4Q8NDX1 1056 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 RIPOR3Q96MK2 946 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 GON7Q9BXV9 100 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 C6orf62Q9GZU0 229 aaPredicted RBP20.15■□□□□ 0.82
RARA-201ENST00000254066 NUAK2Q9H093 628 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 ACTR8Q9H981 624 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 PLEKHA5Q9HAU0 1116 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 MYOZ2Q9NPC6 264 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 NUDT5Q9UKK9 219 aa20.15■□□□□ 0.82
RARA-201ENST00000254066 AIREO43918 545 aa20.14■□□□□ 0.82
RARA-201ENST00000254066 EFNA1P20827 205 aaPredicted RBP20.14■□□□□ 0.82
RARA-201ENST00000254066 ARL1P40616 181 aaPredicted RBP20.14■□□□□ 0.82
RARA-201ENST00000254066 PPP3CCP48454 512 aa20.14■□□□□ 0.82
RARA-201ENST00000254066 FPGSQ05932 587 aa20.14■□□□□ 0.82
RARA-201ENST00000254066 LCP2Q13094 533 aa20.14■□□□□ 0.82
RARA-201ENST00000254066 GALNT3Q14435 633 aa20.14■□□□□ 0.82
RARA-201ENST00000254066 OTOP3Q7RTS5 596 aa20.14■□□□□ 0.82
RARA-201ENST00000254066 KBTBD8Q8NFY9 601 aa20.14■□□□□ 0.82
RARA-201ENST00000254066 OR6B3Q8NGW1 331 aa20.14■□□□□ 0.82
RARA-201ENST00000254066 TBC1D20Q96BZ9 403 aa20.14■□□□□ 0.82
RARA-201ENST00000254066 SIGLEC11Q96RL6 698 aa20.14■□□□□ 0.82
RARA-201ENST00000254066 APOL4Q9BPW4 351 aa20.14■□□□□ 0.82
RARA-201ENST00000254066 PIGVQ9NUD9 493 aa20.14■□□□□ 0.82
RARA-201ENST00000254066 EHD3Q9NZN3 535 aa20.14■□□□□ 0.82
RARA-201ENST00000254066 ZNF214Q9UL59 606 aaPredicted RBP20.14■□□□□ 0.82
RARA-201ENST00000254066 CDH9Q9ULB4 789 aa20.14■□□□□ 0.82
RARA-201ENST00000254066 ADAMTS5Q9UNA0 930 aa20.14■□□□□ 0.82
RARA-201ENST00000254066 THSD7BQ9C0I4 1608 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 HMX3A6NHT5 357 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 ADORA2BP29275 332 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 CASP2P42575 452 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 GPR50Q13585 617 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 KCTD2Q14681 263 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 XKR7Q5GH72 579 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 SNAP47Q5SQN1 464 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 CCNJQ5T5M9 372 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 GPR158Q5T848 1215 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 CCDC28AQ8IWP9 274 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 SYTL1Q8IYJ3 562 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 ELMOD2Q8IZ81 293 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 SLC22A15Q8IZD6 547 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 ZNF540Q8NDQ6 660 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 TMCO6Q96DC7 493 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 CAPNS2Q96L46 248 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 FICDQ9BVA6 458 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 GABARAPL1Q9H0R8 117 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 PIF1Q9H611 641 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 MINDY3Q9H8M7 445 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 POLR3BQ9NW08 1133 aaPredicted RBP20.14■□□□□ 0.81
RARA-201ENST00000254066 ADPRHL2Q9NX46 363 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 PNMA8BQ9ULN7 279 aaPredicted RBP20.14■□□□□ 0.81
RARA-201ENST00000254066 TRAPPC4Q9Y296 219 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 BTRCQ9Y297 605 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 AP3M1Q9Y2T2 418 aa20.14■□□□□ 0.81
RARA-201ENST00000254066 SCELO95171 688 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms