RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 PJA1Q8NG27 643 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 ZCCHC10Q8TBK6 192 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 FCRL2Q96LA5 508 aaPredicted RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 FXYD6Q9H0Q3 95 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 DNAJC11Q9NVH1 559 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 PCDHGC3Q9UN70 934 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 PHF24Q9UPV7 400 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 PCDHGA7Q9Y5G6 932 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 UROSP10746 265 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 CPN2P22792 545 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 SLC1A2P43004 574 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 PRKD1Q15139 912 aaPredicted RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 CPTPQ5TA50 214 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 GALNT10Q86SR1 603 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 Q8N9G6 341 aaPredicted RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 AGO3Q9H9G7 860 aaKnown RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 BAIAP2Q9UQB8 552 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 NCAM2O15394 837 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 MLYCDO95822 493 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 SLC25A27O95847 323 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 TARBP2Q15633 366 aaKnown RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 WSCD2Q2TBF2 565 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 AFTPHQ6ULP2 937 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 PCDH19Q8TAB3 1148 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 CDCA5Q96FF9 252 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 RHOJQ9H4E5 214 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 PTPN3P26045 913 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 SLC9A9Q8IVB4 645 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 ANKRD52Q8NB46 1076 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 DQX1Q8TE96 717 aaKnown RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 IPPKQ9H8X2 491 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 MBD2Q9UBB5 411 aa7.43□□□□□ -1.22
RIF1-201ENST00000243326 NOCTQ9UK39 431 aaKnown RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 PTBP2Q9UKA9 531 aaKnown RBP7.43□□□□□ -1.22
RIF1-201ENST00000243326 TEX46H3BTG2 121 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 PCCBP05166 539 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 FDX1P10109 184 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 RPL17P18621 184 aaKnown RBP7.42□□□□□ -1.22
RIF1-201ENST00000243326 ENPEPQ07075 957 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 RAB6CQ53S08 254 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 TPRG1LQ5T0D9 272 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 ZNF517Q6ZMY9 492 aaPredicted RBP7.42□□□□□ -1.22
RIF1-201ENST00000243326 RAB6CQ9H0N0 254 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 INTS10Q9NVR2 710 aaKnown RBP7.42□□□□□ -1.22
RIF1-201ENST00000243326 ERVK-18Q9QC07 812 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 FKBPLQ9UIM3 349 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 PLAGL1Q9UM63 463 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 SNX6Q9UNH7 406 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 M0R129 80 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 ZNF662Q6ZS27 426 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 ZMIZ2Q8NF64 920 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 TSEN15Q8WW01 171 aaKnown RBP7.42□□□□□ -1.22
RIF1-201ENST00000243326 TMEM169Q96HH4 297 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.42□□□□□ -1.22
RIF1-201ENST00000243326 PREX1Q8TCU6 1659 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 PGRMC2O15173 223 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 CDRT1O95170 752 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 CYP3A7P24462 503 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 RHDQ02161 417 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 GCNT6Q5T4J0 391 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 AKAP1Q92667 903 aaKnown RBP eCLIP7.42□□□□□ -1.22
RIF1-201ENST00000243326 TRMT61BQ9BVS5 477 aaKnown RBP7.42□□□□□ -1.22
RIF1-201ENST00000243326 FCF1Q9Y324 198 aaKnown RBP7.42□□□□□ -1.22
RIF1-201ENST00000243326 CNTNAP1P78357 1384 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 UGT2B11O75310 529 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 NIPSNAP2O75323 286 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 SNAP29O95721 258 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 AVPR1BP47901 424 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 OGDHQ02218 1023 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 TMEM132BQ14DG7 1078 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 OR6C4Q8NGE1 309 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 MTERF1Q99551 399 aaKnown RBP7.42□□□□□ -1.22
RIF1-201ENST00000243326 ZW10O43264 779 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 KLRC2P26717 231 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 RCVRNP35243 200 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 CXCL9Q07325 125 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 TIMM50Q3ZCQ8 353 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 PIWIL3Q7Z3Z3 882 aaKnown RBP7.42□□□□□ -1.22
RIF1-201ENST00000243326 GALNT6Q8NCL4 622 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 OR8K3Q8NH51 312 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 SHISA4Q96DD7 197 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 FAM129BQ96TA1 746 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 MLXQ9UH92 298 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 TCAF2A6NFQ2 919 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 E9PAM4 449 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 CDC7O00311 574 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 AGTR2P50052 363 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 HFE2Q6ZVN8 426 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 PIWIL4Q7Z3Z4 852 aaKnown RBP7.42□□□□□ -1.22
RIF1-201ENST00000243326 PARPBPQ9NWS1 579 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 USP32Q8NFA0 1604 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 ZNF541Q9H0D2 1346 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 CLDN25C9JDP6 229 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 ARSAP15289 507 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 CYP3A5P20815 502 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 GDF5P43026 501 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 CCL23P55773 120 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 TIGD4Q8IY51 512 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 APBB2Q92870 758 aa7.42□□□□□ -1.22
RIF1-201ENST00000243326 COL20A1Q9P218 1284 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms