RNA–Protein interactions for RNA: ENST00000240185.7

TARDBP-201, Transcript of TAR DNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TARDBP, Length 5,367 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-201ENST00000240185 GPSM3Q9Y4H4 160 aa13.69□□□□□ -0.22
TARDBP-201ENST00000240185 ASTN1O14525 1302 aa13.69□□□□□ -0.22
TARDBP-201ENST00000240185 M0R233 179 aa13.69□□□□□ -0.22
TARDBP-201ENST00000240185 STK16O75716 305 aa13.69□□□□□ -0.22
TARDBP-201ENST00000240185 GSTT2P0CG29 244 aa13.69□□□□□ -0.22
TARDBP-201ENST00000240185 RGS19P49795 217 aa13.69□□□□□ -0.22
TARDBP-201ENST00000240185 TLR1Q15399 786 aa13.69□□□□□ -0.22
TARDBP-201ENST00000240185 WSCD1Q658N2 575 aa13.69□□□□□ -0.22
TARDBP-201ENST00000240185 C1orf186Q6ZWK4 172 aa13.69□□□□□ -0.22
TARDBP-201ENST00000240185 ZNF627Q7L945 461 aa13.69□□□□□ -0.22
TARDBP-201ENST00000240185 PHOX2BQ99453 314 aa13.69□□□□□ -0.22
TARDBP-201ENST00000240185 GATA5Q9BWX5 397 aaPredicted RBP13.69□□□□□ -0.22
TARDBP-201ENST00000240185 PCDHAC1Q9H158 963 aa13.69□□□□□ -0.22
TARDBP-201ENST00000240185 RCOR3Q9P2K3 495 aaPredicted RBP13.69□□□□□ -0.22
TARDBP-201ENST00000240185 LGALS13Q9UHV8 139 aa13.69□□□□□ -0.22
TARDBP-201ENST00000240185 PCDHB9Q9Y5E1 797 aa13.69□□□□□ -0.22
TARDBP-201ENST00000240185 PCDHB12Q9Y5F1 795 aa13.69□□□□□ -0.22
TARDBP-201ENST00000240185 TTC34A8MYJ7 566 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 TPST2O60704 377 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 PKMP14618 531 aaKnown RBP13.68□□□□□ -0.22
TARDBP-201ENST00000240185 ZNF81P51508 661 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 VLDLRP98155 873 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 FASTKD3Q14CZ7 662 aaKnown RBP13.68□□□□□ -0.22
TARDBP-201ENST00000240185 ZNF557Q8N988 423 aaPredicted RBP13.68□□□□□ -0.22
TARDBP-201ENST00000240185 NSMCE3Q96MG7 304 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 EBF2Q9HAK2 575 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 TMPRSS4Q9NRS4 437 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 AGO1Q9UL18 857 aaKnown RBP13.68□□□□□ -0.22
TARDBP-201ENST00000240185 TRPV2Q9Y5S1 764 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 CRB1P82279 1406 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 ZNF208O43345 1280 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 KCNQ2O43526 872 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 RECQL4O94761 1208 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 IFNA21P01568 189 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 TPSB2P20231 275 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 FNTBP49356 437 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 BACE1P56817 501 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 PRKD1Q15139 912 aaPredicted RBP13.68□□□□□ -0.22
TARDBP-201ENST00000240185 TPSAB1Q15661 275 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 ALKBH2Q6NS38 261 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 TMEM17Q86X19 198 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 OXR1Q8N573 874 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 RIOK2Q9BVS4 552 aaKnown RBP13.68□□□□□ -0.22
TARDBP-201ENST00000240185 YTHDF1Q9BYJ9 559 aaKnown RBP13.68□□□□□ -0.22
TARDBP-201ENST00000240185 PCDH18Q9HCL0 1135 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 TBCCD1Q9NVR7 557 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 AXLP30530 894 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 COQ8BQ96D53 544 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 BRINP2Q9C0B6 783 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 DPP7Q9UHL4 492 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 MED31Q9Y3C7 131 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 ABCC3O15438 1527 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 A0A1W2PRQ8 180 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 AGPSO00116 658 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 SLC25A14O95258 325 aaPredicted RBP13.68□□□□□ -0.22
TARDBP-201ENST00000240185 CLDN9O95484 217 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 NTSR2O95665 410 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 CYP11A1P05108 521 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 MSL3P1P0C860 447 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 CYP3A5P20815 502 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 LCN1P31025 176 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 HUNKP57058 714 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 GRM3Q14832 879 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 ANKDD1AQ495B1 522 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 PM20D2Q8IYS1 436 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 FBXL16Q8N461 479 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 CPT1BQ92523 772 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 DHRS1Q96LJ7 313 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 LGR4Q9BXB1 951 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 RNF17Q9BXT8 1623 aaKnown RBP13.68□□□□□ -0.22
TARDBP-201ENST00000240185 SCAMP3O14828 347 aaKnown RBP13.68□□□□□ -0.22
TARDBP-201ENST00000240185 PLD2O14939 933 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 AURKAO14965 403 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 KLRC4O43908 158 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 IL1R1P14778 569 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 KLRK1P26718 216 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 TEAD4Q15561 434 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 SCGB2B2Q4G0G5 96 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 TMEM192Q8IY95 271 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 PHC3Q8NDX5 983 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 DNERQ8NFT8 737 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 STON2Q8WXE9 905 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 TMEM203Q969S6 136 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 FERD3LQ96RJ6 166 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 HBEGFQ99075 208 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 LIN28AQ9H9Z2 209 aaKnown RBP13.68□□□□□ -0.22
TARDBP-201ENST00000240185 C1orf109Q9NX04 203 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 GDAP2Q9NXN4 497 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 MRTO4Q9UKD2 239 aaKnown RBP13.68□□□□□ -0.22
TARDBP-201ENST00000240185 RIMKLBQ9ULI2 386 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 NR2E1Q9Y466 385 aa13.68□□□□□ -0.22
TARDBP-201ENST00000240185 A2ML1A8K2U0 1454 aa13.67□□□□□ -0.22
TARDBP-201ENST00000240185 MAGEB17A8MXT2 336 aa13.67□□□□□ -0.22
TARDBP-201ENST00000240185 VAMP1P23763 118 aa13.67□□□□□ -0.22
TARDBP-201ENST00000240185 MTPNP58546 118 aa13.67□□□□□ -0.22
TARDBP-201ENST00000240185 TARDBPQ13148 414 aaKnown RBP eCLIP13.67□□□□□ -0.221e-13■■■■■ 26.9
TARDBP-201ENST00000240185 TMEM44Q2T9K0 475 aa13.67□□□□□ -0.22
TARDBP-201ENST00000240185 FBXO48Q5FWF7 155 aa13.67□□□□□ -0.22
TARDBP-201ENST00000240185 BRMS1LQ5PSV4 323 aa13.67□□□□□ -0.22
TARDBP-201ENST00000240185 TCEAL6Q6IPX3 200 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms