RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 AprtP08030 180 aa11.42□□□□□ -0.58
Col9a1-202ENSMUST00000088349 ApoeP08226 311 aa11.42□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Pcmt1P23506 227 aa11.42□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Kcnj2P35561 428 aa11.42□□□□□ -0.58
Col9a1-202ENSMUST00000088349 PrkczQ02956 592 aa11.42□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Trmt10cQ3UFY8 414 aaKnown RBP11.42□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Col11a1Q61245 1804 aa11.42□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Fgfr3Q61851 801 aa11.42□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Gpr142Q7TQN9 365 aa11.42□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Olfr1046Q7TR79 316 aa11.42□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Klhl42Q8BFQ9 493 aa11.42□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Prox2Q8BII1 593 aa11.42□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Ppp1r1cQ8BKK4 108 aa11.42□□□□□ -0.58
Col9a1-202ENSMUST00000088349 4932411N23RikQ8C0S0 470 aa11.42□□□□□ -0.58
Col9a1-202ENSMUST00000088349 IrgcQ8C262 412 aa11.42□□□□□ -0.58
Col9a1-202ENSMUST00000088349 DcxrQ91X52 244 aa11.42□□□□□ -0.58
Col9a1-202ENSMUST00000088349 EedQ921E6 441 aaKnown RBP11.42□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Fastkd2Q922E6 689 aaKnown RBP11.42□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Ska2Q9CR46 120 aa11.42□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Krt6bQ9Z331 562 aa11.42□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Veph1A1A535 833 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Zfp992B1ASD8 573 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Rnf169E9Q7F2 694 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Hk2O08528 917 aaKnown RBP11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Hcn1O88704 910 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 P04213 122 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Tap1P21958 724 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Nr5a2P45448 560 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Kcnj13P86046 360 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 MitfQ08874 526 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Wbp4Q61048 376 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 RbfaQ6P3B9 350 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Olfr366Q7TRY4 309 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Pnpla8Q8K1N1 776 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Zfp991Q8R1N3 573 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Nprl3Q8VIJ8 569 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Slc13a3Q91Y63 600 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Q922M7 232 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Chid1Q922Q9 393 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Wdr12Q9JJA4 423 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Pin1Q9QUR7 165 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Znf106O88466 1888 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Cylc2B1AWN8 422 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Zfp563B8JJZ9 448 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Aif1O70200 147 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 JunP05627 334 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Mbl1P39039 239 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Dnal1Q05A62 190 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Abraxas2Q3TCJ1 415 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Slc25a23Q6GQS1 467 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Klhl5Q6PFE1 708 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Olfr834Q7TRG8 312 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Zfp719Q8BIV1 735 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 MaelQ8BVN9 434 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Ldhal6bQ8BVP2 382 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Gucy1b2Q8BXH3 824 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Casp9Q8C3Q9 454 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Olfr665Q8VG79 316 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Akirin1Q99LF1 191 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Tmem53Q9D0Z3 276 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Tspan11Q9D1D1 253 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Spesp1Q9D5A0 399 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Tmprss6Q9DBI0 811 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Fam166bA2AIP0 273 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Gbp11A9YVJ5 442 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Vmn2r50E9PW61 861 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Ackr2O08707 378 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Angpt2O35608 496 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 JunbP09450 344 aaKnown RBP11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 F3P20352 294 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Gria1P23818 907 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 S100a9P31725 113 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Sat1P48026 171 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Sox2P48432 319 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Sap25Q1EHW4 186 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Tnks2Q3UES3 1166 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Plk5Q4FZD7 595 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Slc6a4Q60857 630 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Kcna5Q61762 602 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 TCAIMQ66JZ4 499 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Fnip1Q68FD7 1165 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Tatdn1Q6P8M1 295 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Cnih3Q6ZWS4 160 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Trim62Q80V85 475 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Taf10Q8K0H5 218 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Vmn1r203Q8R273 311 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Mta3Q924K8 591 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 MpstQ99J99 297 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Fars2Q99M01 451 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Fbxo32Q9CPU7 355 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Rpl34Q9D1R9 117 aaKnown RBP11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Haus5Q9D786 619 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Snx5Q9D8U8 404 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Aff4Q9ESC8 1160 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Hapln2Q9ESM3 341 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Rpl38Q9JJI8 70 aaKnown RBP11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Katna1Q9WV86 491 aa11.41□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Lcn6A2AJB9 181 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Pnldc1B2RXZ1 531 aa11.4□□□□□ -0.58
Col9a1-202ENSMUST00000088349 Gm8237E9Q257 205 aa11.4□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms