RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Mau2Q9D2X5 619 aaKnown RBP11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gtf2e2Q9D902 292 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Rgs17Q9QZB0 210 aa11.82□□□□□ -0.52
Trim56-201ENSMUST00000054384 Zscan4eA0A1B0GRE8 505 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm8220F6YKI2 213 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 AgxtO35423 414 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gja1P23242 382 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Eif5aP63242 154 aaKnown RBP11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 HnrnpdQ60668 355 aaKnown RBP11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Cers6Q8C172 384 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Vmn1r219Q8R271 312 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gtf2h2Q9JIB4 396 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Uchl1Q9R0P9 223 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Snai1Q02085 264 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Oog2Q7TPX8 476 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 RhbgQ8BUX5 455 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Cacul1Q8R0X2 377 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Olfr345Q8VGK4 311 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Aar2Q9D2V5 384 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Q9D4W2 315 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 SmoktcrA2KF29 484 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Smpdl3aP70158 445 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 D13Ertd608eQ3UPR8 151 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Rgl2Q61193 778 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Npr2Q6VVW5 1047 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Syt16Q7TN83 639 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Zdhhc19Q810M5 347 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Kctd15Q8K0E1 283 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ints10Q8K2A7 710 aaKnown RBP11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Slc22a19Q8VCA0 551 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 TmlheQ91ZE0 421 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Klhl22Q99JN2 634 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Hm13Q9D8V0 378 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Mllt3A2AM29 569 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Timm13P62075 95 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Trappc9Q3U0M1 1148 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Wdr75Q3U821 830 aaKnown RBP11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Entpd3Q8BFW6 529 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 RtknQ8C6B2 564 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Kdm1bQ8CIG3 826 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Tmem17Q8K0U3 198 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 AslQ91YI0 464 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 PigqQ9QYT7 581 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Vmn1r3A2AMT7 306 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 9630041A04RikD3Z3U4 205 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Grap2O89100 322 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ap2s1P62743 142 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gtf2bP62915 316 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Kir3dl1P83555 432 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 MaelQ8BVN9 434 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 RhdQ8CF94 418 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Vmn1r79Q8R285 306 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Setd7Q8VHL1 366 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Hbb-bh2B2RVB7 147 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Vmn2r14E9Q759 848 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Acvr2aP27038 513 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 PctpP53808 214 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Rcbtb1Q6NXM2 531 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Svs1Q6WIZ7 820 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Fastkd5Q7TMV3 762 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Defb34Q7TNV8 81 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Sh3d19Q91X43 789 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Klhl33G3UW92 533 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gm3099J3QPA5 205 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Fam221bQ8C627 487 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ubxn6Q99PL6 442 aa11.81□□□□□ -0.52
Trim56-201ENSMUST00000054384 Neu1O35657 409 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Gata5P97489 404 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Q32P12 615 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Olfr855Q7TRF8 312 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Rasgef1bQ8JZL7 473 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Mnd1Q8K396 205 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Fam129bQ8R1F1 749 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Abcg4Q91WA9 646 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Actrt2Q9D9L5 377 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ptar1E9QAB6 424 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 P06324 132 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Kcnq1P97414 668 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ctnnb1Q02248 781 aaKnown RBP11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 GiprQ0P543 460 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Dalrd3Q6PJN8 538 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 NaxeQ8K4Z3 282 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Slc35f5Q8R314 524 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Rnf181Q9CY62 165 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Inpp5eQ9JII1 647 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 CalcrlQ9R1W5 463 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Ptgdr2Q9Z2J6 382 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Neurod4O09105 330 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Cdh12Q5RJH3 794 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Echs1Q8BH95 290 aaKnown RBP11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Nae1Q8VBW6 534 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Lrrc69Q9D9Q0 347 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Tspan4Q9DCK3 238 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Hspb3Q9QZ57 154 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Med20Q9R0X0 212 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Olfr172E9Q8F6 309 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Fth1P09528 182 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Cdh3P10287 822 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 Vps45P97390 570 aa11.8□□□□□ -0.52
Trim56-201ENSMUST00000054384 IfneQ80ZF2 192 aa11.8□□□□□ -0.52
Retrieved 100 of 22,080 RNA–protein pairs in 83.4 ms