RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 GPR142Q7Z601 462 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 PPTC7Q8NI37 304 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 DNAJB9Q9UBS3 223 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 PRAMEF33A0A0G2JMD5 474 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 TCRBV7S3A2A0A539 114 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 PRAMEF10O60809 474 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 PARGQ86W56 976 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 ERI1Q8IV48 349 aaKnown RBP18.28■□□□□ 0.52
SCARB2-213ENST00000638680 SLC43A3Q8NBI5 491 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 OR5K1Q8NHB7 308 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 ESAMQ96AP7 390 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 EXOSC8Q96B26 276 aaKnown RBP18.28■□□□□ 0.52
SCARB2-213ENST00000638680 NSMCE3Q96MG7 304 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 NMUR1Q9HB89 426 aa18.28■□□□□ 0.52
SCARB2-213ENST00000638680 PRAMEF1O95521 474 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 CRYBG2Q8N1P7 616 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 TIFAQ96CG3 184 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 TRNT1Q96Q11 434 aaKnown RBP18.27■□□□□ 0.52
SCARB2-213ENST00000638680 MARCH7Q9H992 704 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 IMP3Q9NV31 184 aaKnown RBP18.27■□□□□ 0.52
SCARB2-213ENST00000638680 ZNF358Q9NW07 568 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 IKZF2Q9UKS7 526 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 MAN2B2Q9Y2E5 1009 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 ATG13O75143 517 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 TAS2R39P59534 338 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 DUSP4Q13115 394 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 FBXO42Q6P3S6 717 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 LINGO4Q6UY18 593 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 JAZF1Q86VZ6 243 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 NAT8LQ8N9F0 302 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 COL1A2P08123 1366 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 OR6C75A6NL08 312 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 C1RP00736 705 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 NDUFV1P49821 464 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 ATXN1P54253 815 aaKnown RBP18.27■□□□□ 0.52
SCARB2-213ENST00000638680 FAM174BQ3ZCQ3 159 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 CERKQ8TCT0 537 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 IRGQQ8WZA9 623 aa18.27■□□□□ 0.52
SCARB2-213ENST00000638680 ZNF214Q9UL59 606 aaPredicted RBP18.27■□□□□ 0.52
SCARB2-213ENST00000638680 SLC15A5A6NIM6 579 aa18.27■□□□□ 0.51
SCARB2-213ENST00000638680 NT5C1B-RDH14C9J2C7 533 aa18.27■□□□□ 0.51
SCARB2-213ENST00000638680 H3BM21 787 aa18.27■□□□□ 0.51
SCARB2-213ENST00000638680 EFNA1P20827 205 aaPredicted RBP18.27■□□□□ 0.51
SCARB2-213ENST00000638680 TACR2P21452 398 aa18.27■□□□□ 0.51
SCARB2-213ENST00000638680 TREML2Q5T2D2 321 aa18.27■□□□□ 0.51
SCARB2-213ENST00000638680 TOR3AQ9H497 397 aa18.27■□□□□ 0.51
SCARB2-213ENST00000638680 SNTG1Q9NSN8 517 aa18.27■□□□□ 0.51
SCARB2-213ENST00000638680 PLK2Q9NYY3 685 aa18.27■□□□□ 0.51
SCARB2-213ENST00000638680 MYCLP1P12525 358 aaPredicted RBP18.27■□□□□ 0.51
SCARB2-213ENST00000638680 CHST15Q7LFX5 561 aaPredicted RBP18.27■□□□□ 0.51
SCARB2-213ENST00000638680 SLC13A3Q8WWT9 602 aa18.27■□□□□ 0.51
SCARB2-213ENST00000638680 BHLHE41Q9C0J9 482 aaPredicted RBP18.27■□□□□ 0.51
SCARB2-213ENST00000638680 TBC1D17Q9HA65 648 aa18.27■□□□□ 0.51
SCARB2-213ENST00000638680 DMAC2Q9NW81 257 aa18.27■□□□□ 0.51
SCARB2-213ENST00000638680 CORO1AP31146 461 aaKnown RBP18.26■□□□□ 0.51
SCARB2-213ENST00000638680 MTFR1LQ9H019 292 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 DTLQ9NZJ0 730 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 FABP12A6NFH5 140 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 L1CAMP32004 1257 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 ANO7Q6IWH7 933 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 CERS6Q6ZMG9 384 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 TAC4Q86UU9 113 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 TMCO6Q96DC7 493 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 NUSAP1Q9BXS6 441 aaKnown RBP18.26■□□□□ 0.51
SCARB2-213ENST00000638680 NIFKQ9BYG3 293 aaKnown RBP18.26■□□□□ 0.51
SCARB2-213ENST00000638680 TBC1D24Q9ULP9 559 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 IGLV3-22A0A075B6J6 115 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 NEDD8-MDP1E9PL57 170 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 IFNA6P05013 189 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 CHRM5P08912 532 aaPredicted RBP18.26■□□□□ 0.51
SCARB2-213ENST00000638680 CKMT2P17540 419 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 ZNF613Q6PF04 617 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 NAT16Q8N8M0 369 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 MALT1Q9UDY8 824 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 NR2E3Q9Y5X4 410 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 GPR25O00155 361 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 TSPAN1O60635 241 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 ASLP04424 464 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 HTR7P34969 479 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 TIE1P35590 1138 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 PTGES3Q15185 160 aaKnown RBP18.26■□□□□ 0.51
SCARB2-213ENST00000638680 GPR153Q6NV75 609 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 RTL4Q6ZR62 310 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 CIR1Q86X95 450 aaPredicted RBP18.26■□□□□ 0.51
SCARB2-213ENST00000638680 CPNE9Q8IYJ1 553 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 ZNF563Q8TA94 476 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 MYOCQ99972 504 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 IGSF9Q9P2J2 1179 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 CD84Q9UIB8 345 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 PCDHGA10Q9Y5H3 936 aa18.26■□□□□ 0.51
SCARB2-213ENST00000638680 SMIM35A0A1B0GVV1 85 aa18.25■□□□□ 0.51
SCARB2-213ENST00000638680 C22orf31O95567 290 aa18.25■□□□□ 0.51
SCARB2-213ENST00000638680 TUSC3Q13454 348 aa18.25■□□□□ 0.51
SCARB2-213ENST00000638680 KAT2AQ92830 837 aa18.25■□□□□ 0.51
SCARB2-213ENST00000638680 ZNF317Q96PQ6 595 aaPredicted RBP18.25■□□□□ 0.51
SCARB2-213ENST00000638680 TTYH1Q9H313 450 aaPredicted RBP18.25■□□□□ 0.51
SCARB2-213ENST00000638680 TMLHEQ9NVH6 421 aa18.25■□□□□ 0.51
SCARB2-213ENST00000638680 SLC27A6Q9Y2P4 619 aa18.25■□□□□ 0.51
SCARB2-213ENST00000638680 TPST2O60704 377 aa18.25■□□□□ 0.51
SCARB2-213ENST00000638680 XRCC1P18887 633 aaPredicted RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms