RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 CCL7P80098 99 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 CALCOCO2Q13137 446 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 CAMK2BQ13554 666 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 TMED2Q15363 201 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 WHAMMP3Q1A5X7 153 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 ANKRD22Q5VYY1 191 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 WDR74Q6RFH5 385 aaPredicted RBP13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 TMEM26Q6ZUK4 368 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 ZNF572Q7Z3I7 529 aaPredicted RBP13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 TMEM135Q86UB9 458 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 PLXDC1Q8IUK5 500 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 PIANPQ8IYJ0 282 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 OTUD6BQ8N6M0 293 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 Q8N9G6 341 aaPredicted RBP13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 MNS1Q8NEH6 495 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 OR4D9Q8NGE8 314 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 GPR150Q8NGU9 434 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 WDR36Q8NI36 951 aaKnown RBP13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 PATE1Q8WXA2 126 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 STAMBPL1Q96FJ0 436 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 ZNF778Q96MU6 729 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 RAB17Q9H0T7 212 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 CCDC86Q9H6F5 360 aaKnown RBP13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 EPB41L5Q9HCM4 733 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 SLC2A6Q9UGQ3 507 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 GNPTGQ9UJJ9 305 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 CDC23Q9UJX2 597 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 PCDHB1Q9Y5F3 818 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 PCDHGA8Q9Y5G5 932 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 MRFAP1Q9Y605 127 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 MAD1L1Q9Y6D9 718 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 RPS6KL1Q9Y6S9 549 aa13.73□□□□□ -0.21
SNRPA1-216ENST00000626000 BPTFQ12830 3046 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 IGHV1OR21-1A0A087WYE8 117 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 A0A1W2PQM1 296 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 FAM149AA5PLN7 773 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 TRABD2BA6NFA1 517 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 EFCAB8A8MWE9 144 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 HGSO14964 777 aaPredicted RBP13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 VAPBO95292 243 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 APOA4P06727 396 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 MTHFD1P11586 935 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 RPS3P23396 243 aaKnown RBP eCLIP13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 RPL10P27635 214 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 NMBRP28336 390 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 PBLDP30039 288 aaPredicted RBP13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 LSSP48449 732 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 ARL4CP56559 192 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 ILF2Q12905 390 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 THOC5Q13769 683 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 NFE2L1Q14494 772 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 SEPT7Q16181 437 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 HIF1AQ16665 826 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 TYSND1Q2T9J0 566 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 SYTL3Q4VX76 610 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 CFAP206Q8IYR0 622 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 C17orf53Q8N3J3 647 aaPredicted RBP13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 ASZ1Q8WWH4 475 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 ZNF669Q96BR6 464 aaPredicted RBP13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 MFSD3Q96ES6 412 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 KRT12Q99456 494 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 CMKLR1Q99788 373 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 FAM167BQ9BTA0 163 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 CARD6Q9BX69 1037 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 COG4Q9H9E3 785 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 POLR1BQ9H9Y6 1135 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 SLC40A1Q9NP59 571 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 INTS10Q9NVR2 710 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 RABGEF1Q9UJ41 708 aa13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 UTP11Q9Y3A2 253 aaKnown RBP13.72□□□□□ -0.21
SNRPA1-216ENST00000626000 PIKFYVEQ9Y2I7 2098 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 ACACBO00763 2458 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 UNC13CQ8NB66 2214 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 TPRP12270 2363 aaKnown RBP13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 GOLGA8MH3BSY2 632 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 FANCGO15287 622 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 TOX3O15405 576 aaPredicted RBP13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 TTI1O43156 1089 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 B4GAT1O43505 415 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 SGTAO43765 313 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 DXOO77932 396 aaKnown RBP13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 SEC31AO94979 1220 aaKnown RBP13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 EML2O95834 649 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 ESR1P03372 595 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 RPN2P04844 631 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 BRAFP15056 766 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 SLC19A1P41440 591 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 CDKN1CP49918 316 aaPredicted RBP13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 DRG2P55039 364 aaKnown RBP13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 OR1D5P58170 312 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 CAV1Q03135 178 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 ZFP36L1Q07352 338 aaKnown RBP13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 KRT33BQ14525 404 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 RPE65Q16518 533 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 LONRF1Q17RB8 773 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 AMZ1Q400G9 498 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 ANKRD20A4Q4UJ75 823 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 SPANXN3Q5MJ09 141 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 NEPROQ6NW34 567 aa13.71□□□□□ -0.21
SNRPA1-216ENST00000626000 TMEM71Q6P5X7 295 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms