RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 MAGED4Q96JG8 741 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 RPRD1AQ96P16 312 aaPredicted RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 SNX18Q96RF0 628 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 SPON2Q9BUD6 331 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 FICDQ9BVA6 458 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 FTHL17Q9BXU8 183 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 SAV1Q9H4B6 383 aaPredicted RBP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 MANSC1Q9H8J5 431 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 GKN1Q9NS71 199 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 RBM22Q9NW64 420 aaKnown RBP eCLIP5.51□□□□□ -1.53
CPNE4-214ENST00000617767 TINAGQ9UJW2 476 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 ZNF221Q9UK13 617 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 SPATA2Q9UM82 520 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 FIS1Q9Y3D6 152 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 TESMINQ9Y4I5 508 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 HS3ST4Q9Y661 456 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 MIA3Q5JRA6 1907 aa5.51□□□□□ -1.53
CPNE4-214ENST00000617767 HMX3A6NHT5 357 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 H0YJX3 145 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 H3BNH8 94 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 ARVCFO00192 962 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 NOS1APO75052 506 aaPredicted RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 CLPXO76031 633 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 SLITRK5O94991 958 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 IFNA16P05015 189 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 HEXBP07686 556 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 HAPLN1P10915 354 aaPredicted RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 EEF1DP29692 281 aaKnown RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 CCR1P32246 355 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 SERPINB5P36952 375 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 TALDO1P37837 337 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 SSTP61278 116 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 MLLT1Q03111 559 aaPredicted RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 TOP3AQ13472 1001 aaPredicted RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 ELOAQ14241 798 aaKnown RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 GPNMBQ14956 572 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 PTPRRQ15256 657 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 DNAL1Q4LDG9 190 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 ESCO2Q56NI9 601 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 RAB41Q5JT25 222 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 TCHHL1Q5QJ38 904 aaPredicted RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 PIK3R6Q5UE93 754 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 GARNL3Q5VVW2 1013 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 KIAA1614Q5VZ46 1190 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 KRT80Q6KB66 452 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 DENND6AQ8IWF6 608 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 PHC2Q8IXK0 858 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 FIBCD1Q8N539 461 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 BANPQ8N9N5 519 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 ARNTL2Q8WYA1 636 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 SNAPC3Q92966 411 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 NT5C3BQ969T7 300 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 TESCQ96BS2 214 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 RMND5BQ96G75 393 aaPredicted RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 ZNF347Q96SE7 839 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 TTYH2Q9BSA4 534 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 C9orf16Q9BUW7 83 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 FRMD8P1Q9BZ68 369 aaPredicted RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 NANOGQ9H9S0 305 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 RGS18Q9NS28 235 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 LAMP5Q9UJQ1 280 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 MAPRE3Q9UPY8 281 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 ANKRD6Q9Y2G4 727 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 MTF2Q9Y483 593 aaPredicted RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 A0A1W2PRQ8 180 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 SH3D21A4FU49 640 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 GRXCR2A6NFK2 248 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 CENPXA8MT69 81 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 E9PAM4 449 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 M0QZQ0 153 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 ZNF701M0R085 212 aaPredicted RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 BTN3A1O00481 513 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 IRAK2O43187 625 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 BNIP3LO60238 219 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 SNAP91O60641 907 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 PTP4A3O75365 173 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 VAPBO95292 243 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 DLGAP3O95886 979 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 SELPP16109 830 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 CCNA2P20248 432 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 TYK2P29597 1187 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 CCR10P46092 362 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 S100A12P80511 92 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 CREB5Q02930 508 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 GALNT2Q10471 571 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 STX3Q13277 289 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 PRKD1Q15139 912 aaPredicted RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 CES4AQ5XG92 561 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 POMZP3Q6PJE2 187 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 KYAT3Q6YP21 454 aaKnown RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 HPS6Q86YV9 775 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 ARMC8Q8IUR7 673 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 ARID3BQ8IVW6 561 aaPredicted RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 TAGAPQ8N103 731 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 PQLC1Q8N2U9 271 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 SVIPQ8NHG7 77 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 ZSCAN18Q8TBC5 510 aaPredicted RBP5.5□□□□□ -1.53
CPNE4-214ENST00000617767 PHOSPHO2Q8TCD6 241 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 DENND1AQ8TEH3 1009 aa5.5□□□□□ -1.53
CPNE4-214ENST00000617767 MZB1Q8WU39 189 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms