RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 SHROOM3Q8TF72 1996 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.92□□□□□ -0.34
FOXN3-219ENST00000615335 A0A1B0GVM2 712 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 TCAF2A6NFQ2 919 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 ERI2A8K979 691 aaKnown RBP12.92□□□□□ -0.34
FOXN3-219ENST00000615335 AP3B1O00203 1094 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 NCAM2O15394 837 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 HOXC11O43248 304 aaPredicted RBP12.92□□□□□ -0.34
FOXN3-219ENST00000615335 BCAS2O75934 225 aaPredicted RBP12.92□□□□□ -0.34
FOXN3-219ENST00000615335 C2P06681 752 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 FOSL2P15408 326 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 TCF3P15923 654 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 CTRB1P17538 263 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 KCNA5P22460 613 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 PRKCQQ04759 706 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 ZNF177Q13360 481 aaPredicted RBP12.92□□□□□ -0.34
FOXN3-219ENST00000615335 CERCAMQ5T4B2 595 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 CTRB2Q6GPI1 263 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 KCNMB4Q86W47 210 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 ZC3H7AQ8IWR0 971 aaKnown RBP12.92□□□□□ -0.34
FOXN3-219ENST00000615335 UMODL1-AS1Q8N2C9 162 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 NATD1Q8N6N6 113 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 FAM47BQ8NA70 645 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 HJURPQ8NCD3 748 aaPredicted RBP12.92□□□□□ -0.34
FOXN3-219ENST00000615335 BHLHE22Q8NFJ8 381 aaPredicted RBP12.92□□□□□ -0.34
FOXN3-219ENST00000615335 RAB2BQ8WUD1 216 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 MFSD3Q96ES6 412 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 LRRC3BQ96PB8 259 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 MYADMQ96S97 322 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 SLC39A8Q9C0K1 460 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 RUBCNLQ9H714 662 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 NEK6Q9HC98 313 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 AASDHPPTQ9NRN7 309 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 C20orf96Q9NUD7 363 aaPredicted RBP12.92□□□□□ -0.34
FOXN3-219ENST00000615335 MID2Q9UJV3 735 aa12.92□□□□□ -0.34
FOXN3-219ENST00000615335 MAGEB16A2A368 324 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 FADS2P1A8MWK0 482 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 EVPLLA8MZ36 301 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 H0Y626 953 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 MTSS1O43312 755 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 CYBBP04839 570 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 MAPKAPK2P49137 400 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 NPY2RP49146 381 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 NUMBP49757 651 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 MPPE1Q53F39 396 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 CEP78Q5JTW2 689 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 PERM1Q5SV97 790 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 KCTD11Q693B1 232 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 GPR153Q6NV75 609 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 ZNF786Q8N393 782 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 CARNMT1Q8N4J0 409 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 EFCAB3Q8N7B9 438 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 SNX31Q8N9S9 440 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 PNPT1Q8TCS8 783 aaKnown RBP12.91□□□□□ -0.34
FOXN3-219ENST00000615335 AGR3Q8TD06 166 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 MAPK15Q8TD08 544 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 BPIFB1Q8TDL5 484 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 TTC9Q92623 222 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 RSPRY1Q96DX4 576 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 SH3YL1Q96HL8 342 aaPredicted RBP12.91□□□□□ -0.34
FOXN3-219ENST00000615335 NECTIN4Q96NY8 510 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 COQ7Q99807 217 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 GATA5Q9BWX5 397 aaPredicted RBP12.91□□□□□ -0.34
FOXN3-219ENST00000615335 B3GNT4Q9C0J1 378 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 ILKAPQ9H0C8 392 aaPredicted RBP12.91□□□□□ -0.34
FOXN3-219ENST00000615335 RAD21L1Q9H4I0 556 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 ZFP14Q9HCL3 533 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 TCF7L2Q9NQB0 619 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 IARS2Q9NSE4 1012 aaKnown RBP12.91□□□□□ -0.34
FOXN3-219ENST00000615335 STMN3Q9NZ72 180 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 KCNN3Q9UGI6 736 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 PSME2Q9UL46 239 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 A8MU76 341 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 HEPACAM2A8MVW5 462 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.91□□□□□ -0.34
FOXN3-219ENST00000615335 SLC9A3R1O14745 358 aaPredicted RBP12.91□□□□□ -0.34
FOXN3-219ENST00000615335 HTRA2O43464 458 aaPredicted RBP12.91□□□□□ -0.34
FOXN3-219ENST00000615335 DYRK3O43781 588 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 RAMP2O60895 175 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 TMCC2O75069 709 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 DEAF1O75398 565 aaPredicted RBP12.91□□□□□ -0.34
FOXN3-219ENST00000615335 TSPAN9O75954 239 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 APOA4P06727 396 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 LAMP2P13473 410 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 NELFEP18615 380 aaKnown RBP12.91□□□□□ -0.34
FOXN3-219ENST00000615335 GLDCP23378 1020 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 MYF6P23409 242 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 EEF1DP29692 281 aaKnown RBP12.91□□□□□ -0.34
FOXN3-219ENST00000615335 CD68P34810 354 aaPredicted RBP12.91□□□□□ -0.34
FOXN3-219ENST00000615335 PPP2R2BQ00005 443 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 GALNT1Q10472 559 aaPredicted RBP12.91□□□□□ -0.34
FOXN3-219ENST00000615335 POLD3Q15054 466 aaPredicted RBP12.91□□□□□ -0.34
FOXN3-219ENST00000615335 TANGO2Q6ICL3 276 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 CHST9Q7L1S5 443 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 TMEM25Q86YD3 366 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 ARHGAP12Q8IWW6 846 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 RAVER1Q8IY67 606 aaKnown RBP12.91□□□□□ -0.34
FOXN3-219ENST00000615335 ADGRG2Q8IZP9 1017 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 MYO1HQ8N1T3 1032 aa12.91□□□□□ -0.34
FOXN3-219ENST00000615335 ASCC1Q8N9N2 400 aaKnown RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms