RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 APMAPQ9HDC9 416 aa14.76□□□□□ -0.05
LIG1-215ENST00000597901 EPHA6Q9UF33 1036 aa14.76□□□□□ -0.05
LIG1-215ENST00000597901 CRLS1Q9UJA2 301 aa14.76□□□□□ -0.05
LIG1-215ENST00000597901 BPTFQ12830 3046 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 BAHCC1Q9P281 2608 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 KLHL33A6NCF5 533 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 KIF1CO43896 1103 aaKnown RBP14.75□□□□□ -0.05
LIG1-215ENST00000597901 RAD1O60671 282 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 AP2A1O95782 977 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 POLBP06746 335 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 RALBP11234 206 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 ATP1B2P14415 290 aaPredicted RBP14.75□□□□□ -0.05
LIG1-215ENST00000597901 ITGALP20701 1170 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 MC4RP32245 332 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 SEPHS1P49903 392 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 CDKN1CP49918 316 aaPredicted RBP14.75□□□□□ -0.05
LIG1-215ENST00000597901 RPS6KA1Q15418 735 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 P3H1Q32P28 736 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 XKR5Q6UX68 686 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 SLC13A5Q86YT5 568 aaPredicted RBP14.75□□□□□ -0.05
LIG1-215ENST00000597901 CACNA2D3Q8IZS8 1091 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 NXPE1Q8N323 547 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 IL22RA1Q8N6P7 574 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 CDKN2AIPNLQ96HQ2 116 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 DNAJC1Q96KC8 554 aaKnown RBP14.75□□□□□ -0.05
LIG1-215ENST00000597901 COPS8Q99627 209 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 FRMD8P1Q9BZ68 369 aaPredicted RBP14.75□□□□□ -0.05
LIG1-215ENST00000597901 WWP1Q9H0M0 922 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 NLE1Q9NVX2 485 aaPredicted RBP14.75□□□□□ -0.05
LIG1-215ENST00000597901 PIH1D1Q9NWS0 290 aaKnown RBP14.75□□□□□ -0.05
LIG1-215ENST00000597901 ZDHHC3Q9NYG2 299 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 PCDHGA4Q9Y5G9 962 aa14.75□□□□□ -0.05
LIG1-215ENST00000597901 H7C0S8 307 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 ARHGAP6O43182 974 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 LIASO43766 372 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 MTHFD1P11586 935 aaKnown RBP14.74□□□□□ -0.05
LIG1-215ENST00000597901 MAP4P27816 1152 aaKnown RBP14.74□□□□□ -0.05
LIG1-215ENST00000597901 CAPZBP47756 277 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 CYP4F2P78329 520 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 FOXM1Q08050 763 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 POU6F1Q14863 301 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 OASLQ15646 514 aaKnown RBP14.74□□□□□ -0.05
LIG1-215ENST00000597901 LINC00303Q3SY05 128 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 SEL1L2Q5TEA6 688 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 MEI1Q5TIA1 1274 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 CACHD1Q5VU97 1274 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 CAPRIN2Q6IMN6 1127 aaKnown RBP14.74□□□□□ -0.05
LIG1-215ENST00000597901 IRGCQ6NXR0 463 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 FAM92BQ6ZTR7 304 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 MICALCLQ6ZW33 695 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 TAS2R42Q7RTR8 314 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 TIPARPQ7Z3E1 657 aaKnown RBP14.74□□□□□ -0.05
LIG1-215ENST00000597901 LINC00523Q86TU6 105 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 SERPINA9Q86WD7 417 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 SPDYE1Q8NFV5 336 aaPredicted RBP14.74□□□□□ -0.05
LIG1-215ENST00000597901 GPR150Q8NGU9 434 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 STYXQ8WUJ0 223 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 ZFPM2Q8WW38 1151 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 C1orf54Q8WWF1 131 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 KLHL6Q8WZ60 621 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 SEMA4CQ9C0C4 833 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 ZNF768Q9H5H4 540 aaKnown RBP14.74□□□□□ -0.05
LIG1-215ENST00000597901 ETNK1Q9HBU6 452 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 IMP3Q9NV31 184 aaKnown RBP14.74□□□□□ -0.05
LIG1-215ENST00000597901 SIDT1Q9NXL6 827 aaKnown RBP14.74□□□□□ -0.05
LIG1-215ENST00000597901 FAM8A1Q9UBU6 413 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 ZNF148Q9UQR1 794 aa14.74□□□□□ -0.05
LIG1-215ENST00000597901 CFAP20Q9Y6A4 193 aaKnown RBP14.74□□□□□ -0.05
LIG1-215ENST00000597901 TRBV5-4A0A0C4DH59 114 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 C17orf113A0A1B0GUU1 675 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 CFAP99D6REC4 459 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 RASSF9O75901 435 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 ITGB2P05107 769 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 PRSS56P0CW18 603 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 LIFP15018 202 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 PSMA3P25788 255 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 SH3BP2P78314 561 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 SNX1Q13596 522 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 ZRANB3Q5FWF4 1079 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 KLHL35Q6PF15 583 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 PRSS42Q7Z5A4 293 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 NLGN4XQ8N0W4 816 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 LILRA3Q8N6C8 439 aaPredicted RBP14.73□□□□□ -0.05
LIG1-215ENST00000597901 EXD3Q8N9H8 876 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 NLGN4YQ8NFZ3 816 aaPredicted RBP14.73□□□□□ -0.05
LIG1-215ENST00000597901 OR52K1Q8NGK4 314 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 EXTL1Q92935 676 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 MED8Q96G25 268 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 C12orf66Q96MD2 445 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 ALS2CR12Q96Q35 445 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 CCM2Q9BSQ5 444 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 SLC12A9Q9BXP2 914 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 SEMA5BQ9P283 1151 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 TMEM184BQ9Y519 407 aaPredicted RBP14.73□□□□□ -0.05
LIG1-215ENST00000597901 SCN8AQ9UQD0 1980 aa14.73□□□□□ -0.05
LIG1-215ENST00000597901 IGLV3-16A0A075B6K0 115 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 MROH6A6NGR9 719 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 ERI2A8K979 691 aaKnown RBP14.72□□□□□ -0.05
LIG1-215ENST00000597901 STK17BO94768 372 aa14.72□□□□□ -0.05
LIG1-215ENST00000597901 IFNB1P01574 187 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms