RNA–Protein interactions for RNA: ENST00000597047.1

ZNF548-206, Transcript of zinc finger protein 548, humanhuman

TSL 3

Gene ZNF548, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-206ENST00000597047 CYTH2Q99418 400 aa9.14□□□□□ -0.95
ZNF548-206ENST00000597047 CCDC77Q9BR77 488 aa9.14□□□□□ -0.95
ZNF548-206ENST00000597047 TIMM29Q9BSF4 260 aa9.14□□□□□ -0.95
ZNF548-206ENST00000597047 PHACTR1Q9C0D0 580 aa9.14□□□□□ -0.95
ZNF548-206ENST00000597047 P2RY12Q9H244 342 aa9.14□□□□□ -0.95
ZNF548-206ENST00000597047 TRNAU1APQ9NX07 287 aaKnown RBP9.14□□□□□ -0.95
ZNF548-206ENST00000597047 NSMCE4AQ9NXX6 385 aa9.14□□□□□ -0.95
ZNF548-206ENST00000597047 MOCS1Q9NZB8 636 aa9.14□□□□□ -0.95
ZNF548-206ENST00000597047 GALPQ9UBC7 116 aa9.14□□□□□ -0.95
ZNF548-206ENST00000597047 TBC1D29Q9UFV1 150 aa9.14□□□□□ -0.95
ZNF548-206ENST00000597047 RABGEF1Q9UJ41 708 aa9.14□□□□□ -0.95
ZNF548-206ENST00000597047 RAB21Q9UL25 225 aa9.14□□□□□ -0.95
ZNF548-206ENST00000597047 SLC39A10Q9ULF5 831 aa9.14□□□□□ -0.95
ZNF548-206ENST00000597047 BTBD3Q9Y2F9 522 aa9.14□□□□□ -0.95
ZNF548-206ENST00000597047 MTO1Q9Y2Z2 717 aaKnown RBP9.14□□□□□ -0.95
ZNF548-206ENST00000597047 PCDHB1Q9Y5F3 818 aa9.14□□□□□ -0.95
ZNF548-206ENST00000597047 CFAP20Q9Y6A4 193 aaKnown RBP9.14□□□□□ -0.95
ZNF548-206ENST00000597047 LAMA1P25391 3075 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 PIKFYVEQ9Y2I7 2098 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 IGLV3-16A0A075B6K0 115 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 TLDC2A0PJX2 215 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 FAM159BA6NKW6 160 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 GPR89AB7ZAQ6 455 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 QSOX1O00391 747 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 TRIM38O00635 465 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 SIGLEC6O43699 453 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 SGTAO43765 313 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 FOXD2O60548 495 aaPredicted RBP9.13□□□□□ -0.95
ZNF548-206ENST00000597047 VPS26AO75436 327 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 ERLIN1O75477 346 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 EML2O95834 649 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 ESR1P03372 595 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 APOA4P06727 396 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 TUBBP07437 444 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 INHBAP08476 426 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 SLC35G4P0C7Q5 338 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 GPR89BP0CG08 455 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 GABRB3P28472 473 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 PDHA2P29803 388 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 CCR7P32248 378 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 SPRP35270 261 aaPredicted RBP9.13□□□□□ -0.95
ZNF548-206ENST00000597047 HALP42357 657 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 MAPK9P45984 424 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 LEPRP48357 1165 aaKnown RBP9.13□□□□□ -0.95
ZNF548-206ENST00000597047 PRLHRP49683 370 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 MAZP56270 477 aaKnown RBP9.13□□□□□ -0.95
ZNF548-206ENST00000597047 IFFO1Q0D2I5 559 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 PDAP1Q13442 181 aaKnown RBP9.13□□□□□ -0.95
ZNF548-206ENST00000597047 LRP8Q14114 963 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 TMED2Q15363 201 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 KLHL38Q2WGJ6 581 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 INAVAQ3KP66 663 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 MAP9Q49MG5 647 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 BCL7AQ4VC05 210 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 GRTP1Q5TC63 336 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 MROH9Q5TGP6 573 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 HECTD2Q5U5R9 776 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 PACS1Q6VY07 963 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 RAPH1Q70E73 1250 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 SLC26A11Q86WA9 606 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 LRRC6Q86X45 466 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 ZNF761Q86XN6 746 aaPredicted RBP9.13□□□□□ -0.95
ZNF548-206ENST00000597047 PHC3Q8NDX5 983 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 DEFB124Q8NES8 71 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 OR2L2Q8NH16 312 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 GPBAR1Q8TDU6 330 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 JPH3Q8WXH2 748 aaPredicted RBP9.13□□□□□ -0.95
ZNF548-206ENST00000597047 GLMNQ92990 594 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 TMEM159Q96B96 161 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 CXorf40BQ96DE9 158 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 SCARF2Q96GP6 870 aaPredicted RBP9.13□□□□□ -0.95
ZNF548-206ENST00000597047 SGSM3Q96HU1 749 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 CNDP2Q96KP4 475 aaKnown RBP9.13□□□□□ -0.95
ZNF548-206ENST00000597047 C12orf66Q96MD2 445 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 PANX3Q96QZ0 392 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 FERD3LQ96RJ6 166 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 GPR21Q99679 349 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 AARSD1Q9BTE6 412 aaKnown RBP9.13□□□□□ -0.95
ZNF548-206ENST00000597047 ZMYND15Q9H091 742 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 CAB39LQ9H9S4 337 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 IMP3Q9NV31 184 aaKnown RBP9.13□□□□□ -0.95
ZNF548-206ENST00000597047 DNAAF2Q9NVR5 837 aaKnown RBP9.13□□□□□ -0.95
ZNF548-206ENST00000597047 ARGLU1Q9NWB6 273 aaPredicted RBP9.13□□□□□ -0.95
ZNF548-206ENST00000597047 TBK1Q9UHD2 729 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 TRMT6Q9UJA5 497 aaKnown RBP9.13□□□□□ -0.95
ZNF548-206ENST00000597047 ST14Q9Y5Y6 855 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 GPR179Q6PRD1 2367 aa9.13□□□□□ -0.95
ZNF548-206ENST00000597047 ZFC3H1O60293 1989 aaKnown RBP9.12□□□□□ -0.95
ZNF548-206ENST00000597047 PRAMEF33A0A0G2JMD5 474 aa9.12□□□□□ -0.95
ZNF548-206ENST00000597047 FAM95CA0A1B0GW59 222 aa9.12□□□□□ -0.95
ZNF548-206ENST00000597047 OR52A4PA6NMU1 304 aa9.12□□□□□ -0.95
ZNF548-206ENST00000597047 RHPN2P1A8MT19 583 aa9.12□□□□□ -0.95
ZNF548-206ENST00000597047 LMO7DNF2Z398 122 aa9.12□□□□□ -0.95
ZNF548-206ENST00000597047 H3BMM5 538 aa9.12□□□□□ -0.95
ZNF548-206ENST00000597047 IFRD1O00458 451 aaPredicted RBP9.12□□□□□ -0.95
ZNF548-206ENST00000597047 DYNC1I1O14576 645 aa9.12□□□□□ -0.95
ZNF548-206ENST00000597047 VIPP01282 170 aa9.12□□□□□ -0.95
ZNF548-206ENST00000597047 SHBGP04278 402 aa9.12□□□□□ -0.95
ZNF548-206ENST00000597047 CD59P13987 128 aa9.12□□□□□ -0.95
ZNF548-206ENST00000597047 RPS3P23396 243 aaKnown RBP eCLIP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms