RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 AGAP9Q5VTM2 703 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 IZUMO3Q5VZ72 239 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 CASC4Q6P4E1 433 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 FOXR1Q6PIV2 292 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 WASH2PQ6VEQ5 465 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 NLRP9Q7RTR0 991 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 IGDCC3Q8IVU1 814 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 SLITRK4Q8IW52 837 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 UNC5BQ8IZJ1 945 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 CACTIN-AS1Q8N1I8 211 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 ZCCHC14Q8WYQ9 949 aaKnown RBP11.29□□□□□ -0.6
VMP1-211ENST00000591315 SLCO2A1Q92959 643 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 PRR11Q96HE9 360 aaPredicted RBP11.29□□□□□ -0.6
VMP1-211ENST00000591315 SIGLEC10Q96LC7 697 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 SLC38A3Q99624 504 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 EPB41L5Q9HCM4 733 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 WASH6PQ9NQA3 447 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 OGFRQ9NZT2 677 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 SATB2Q9UPW6 733 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 AK5Q9Y6K8 562 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 CFAP47Q6ZTR5 3102 aa11.29□□□□□ -0.6
VMP1-211ENST00000591315 KIR2DS5A0A0G2JLQ3 304 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 A0A0G2JNG1 304 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 SDR42E2A6NKP2 422 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 CFAP99D6REC4 459 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 KIR2DS3K7RE56 304 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 TP73O15350 636 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 TCEA3O75764 348 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 VIPP01282 170 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 RALBP11234 206 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 VCLP18206 1134 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 XRCC1P18887 633 aaPredicted RBP11.28□□□□□ -0.6
VMP1-211ENST00000591315 PAFAH1B1P43034 410 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 GPR3P46089 330 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 ARCN1P48444 511 aaKnown RBP11.28□□□□□ -0.6
VMP1-211ENST00000591315 PPM1FP49593 454 aaPredicted RBP11.28□□□□□ -0.6
VMP1-211ENST00000591315 CSE1LP55060 971 aaKnown RBP11.28□□□□□ -0.6
VMP1-211ENST00000591315 INHBCP55103 352 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 GABREP78334 506 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 ZFP36L1Q07352 338 aaKnown RBP11.28□□□□□ -0.6
VMP1-211ENST00000591315 LAMB3Q13751 1172 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 GPR18Q14330 331 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 KIR2DS5Q14953 304 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 C16orf72Q14CZ0 275 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 RTP5Q14D33 572 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 BRD3Q15059 726 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 ST3GAL2Q16842 350 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 MAP9Q49MG5 647 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 ANKRD20A4Q4UJ75 823 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 FASTKD1Q53R41 847 aaKnown RBP11.28□□□□□ -0.6
VMP1-211ENST00000591315 HP1BP3Q5SSJ5 553 aaPredicted RBP11.28□□□□□ -0.6
VMP1-211ENST00000591315 PHF19Q5T6S3 580 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 TMEM26Q6ZUK4 368 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 SLC9B2Q86UD5 537 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 TRIM48Q8IWZ4 208 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 PPIL6Q8IXY8 311 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 KRT222Q8N1A0 295 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 KDF1Q8NAX2 398 aaPredicted RBP11.28□□□□□ -0.6
VMP1-211ENST00000591315 RCBTB1Q8NDN9 531 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 ZNF669Q96BR6 464 aaPredicted RBP11.28□□□□□ -0.6
VMP1-211ENST00000591315 ZNF514Q96K75 400 aaPredicted RBP11.28□□□□□ -0.6
VMP1-211ENST00000591315 LINC00615Q96LM1 132 aaPredicted RBP11.28□□□□□ -0.6
VMP1-211ENST00000591315 CCM2Q9BSQ5 444 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 CCDC86Q9H6F5 360 aaKnown RBP11.28□□□□□ -0.6
VMP1-211ENST00000591315 COG4Q9H9E3 785 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 MRM3Q9HC36 420 aaKnown RBP11.28□□□□□ -0.6
VMP1-211ENST00000591315 CATSPERZQ9NTU4 200 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 IMP3Q9NV31 184 aaKnown RBP11.28□□□□□ -0.6
VMP1-211ENST00000591315 ZMIZ1Q9ULJ6 1067 aa11.28□□□□□ -0.6
VMP1-211ENST00000591315 DNMT3AQ9Y6K1 912 aaPredicted RBP11.28□□□□□ -0.6
VMP1-211ENST00000591315 ZFHX4Q86UP3 3567 aa11.27□□□□□ -0.6
VMP1-211ENST00000591315 NBEAQ8NFP9 2946 aa11.27□□□□□ -0.6
VMP1-211ENST00000591315 ITPR1Q14643 2758 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 IGHV5-10-1A0A0J9YXX1 117 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 OR5K4A6NMS3 321 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 A8MU76 341 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 RAD51CO43502 376 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 TLX3O43711 291 aaPredicted RBP11.27□□□□□ -0.61
VMP1-211ENST00000591315 CPNE6O95741 557 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 MLNP12872 115 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 ETV5P41161 510 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 RPL21P46778 160 aaKnown RBP11.27□□□□□ -0.61
VMP1-211ENST00000591315 GFERP55789 205 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 PPP1CAP62136 330 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 SARNPP82979 210 aaKnown RBP11.27□□□□□ -0.61
VMP1-211ENST00000591315 DHX9Q08211 1270 aaKnown RBP11.27□□□□□ -0.61
VMP1-211ENST00000591315 ITIH4Q14624 930 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 ZNF789Q5FWF6 425 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 SNAP47Q5SQN1 464 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 CAPRIN2Q6IMN6 1127 aaKnown RBP11.27□□□□□ -0.61
VMP1-211ENST00000591315 PACS1Q6VY07 963 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 PIM3Q86V86 326 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 OTUD6BQ8N6M0 293 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 PHC3Q8NDX5 983 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 SPATA4Q8NEY3 305 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 HM13Q8TCT9 377 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 HEXDCQ8WVB3 486 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 NCSTNQ92542 709 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 RSC1A1Q92681 617 aa11.27□□□□□ -0.61
VMP1-211ENST00000591315 CXorf40BQ96DE9 158 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms