RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 RPL10P27635 214 aaKnown RBP10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 CCR7P32248 378 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 CD151P48509 253 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 CLCNKAP51800 687 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 CSE1LP55060 971 aaKnown RBP10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 DMPKQ09013 629 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 LRP8Q14114 963 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 BRD3Q15059 726 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 SEPT7Q16181 437 aaKnown RBP10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 ZC3HC1Q86WB0 502 aaKnown RBP10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 GKN2Q86XP6 184 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 EID2Q8N6I1 236 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 FAM46DQ8NEK8 389 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 MYRIPQ8NFW9 859 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 UBLCP1Q8WVY7 318 aaPredicted RBP10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 PATE1Q8WXA2 126 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 ELMO1Q92556 727 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 CAVIN3Q969G5 261 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 CAMK1GQ96NX5 476 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 SLC30A3Q99726 388 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 CPNE1Q99829 537 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 AARSD1Q9BTE6 412 aaKnown RBP10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 OSGEPL1Q9H4B0 414 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 COG4Q9H9E3 785 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 NSMCE4AQ9NXX6 385 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 SCHIP1Q9P0W5 487 aaPredicted RBP10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 TBC1D29Q9UFV1 150 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 DOLKQ9UPQ8 538 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 WDR37Q9Y2I8 494 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 PCDHB1Q9Y5F3 818 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 PCDHGB2Q9Y5G2 931 aa10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 ARID1BQ8NFD5 2236 aaPredicted RBP10.51□□□□□ -0.73
SMARCA4-213ENST00000587988 ZFHX2Q9C0A1 2572 aaPredicted RBP10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 TRBV23OR9-2A0A075B6M9 112 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 SLC5A10A0PJK1 596 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 A6NCN8 305 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 NEMP2A6NFY4 417 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 B4DGG1 531 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 TPP1O14773 563 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 SH3BP5O60239 455 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 KCNJ13O60928 360 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 FTH1P02794 183 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 SHBGP04278 402 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 BRAFP15056 766 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 CHRM3P20309 590 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 AOAHP28039 575 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 PDHA2P29803 388 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 HSD17B3P37058 310 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 GP5P40197 560 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 PREPP48147 710 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 CLCN7P51798 805 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 CDKN2DP55273 166 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 SLC14A1Q13336 389 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 BOP1Q14137 746 aaKnown RBP10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 CLCA4Q14CN2 919 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 SUZ12Q15022 739 aaKnown RBP10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 HECTD2Q5U5R9 776 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 METRNLQ641Q3 311 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 EMBQ6PCB8 327 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 LVRNQ6Q4G3 990 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 ALYREFQ86V81 257 aaKnown RBP10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 VRK3Q8IV63 474 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 NAGSQ8N159 534 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 SDR16C5Q8N3Y7 309 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 GPATCH11Q8N954 259 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 OR4C6Q8NH72 309 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 GIMAP7Q8NHV1 300 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 HM13Q8TCT9 377 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 ZDHHC1Q8WTX9 485 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 FAM122AQ96E09 287 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 VPS39Q96JC1 886 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 PANX3Q96QZ0 392 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 CYTH2Q99418 400 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 RBBP8Q99708 897 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 OLFM1Q99784 485 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 CCDC68Q9H2F9 335 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 DPEP2Q9H4A9 486 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 RHOJQ9H4E5 214 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 SARS2Q9NP81 518 aaKnown RBP10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 NLGN3Q9NZ94 848 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 SIRPGQ9P1W8 387 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 PSMD13Q9UNM6 376 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 CDYLQ9Y232 598 aa10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 MTO1Q9Y2Z2 717 aaKnown RBP10.5□□□□□ -0.73
SMARCA4-213ENST00000587988 FAM95CA0A1B0GW59 222 aa10.49□□□□□ -0.73
SMARCA4-213ENST00000587988 E5RI56 91 aa10.49□□□□□ -0.73
SMARCA4-213ENST00000587988 POC1B-GALNT4F8VUJ3 575 aa10.49□□□□□ -0.73
SMARCA4-213ENST00000587988 H3BMM5 538 aa10.49□□□□□ -0.73
SMARCA4-213ENST00000587988 SIGLEC6O43699 453 aa10.49□□□□□ -0.73
SMARCA4-213ENST00000587988 NOBOXO60393 691 aa10.49□□□□□ -0.73
SMARCA4-213ENST00000587988 GPC4O75487 556 aa10.49□□□□□ -0.73
SMARCA4-213ENST00000587988 TUBBP07437 444 aa10.49□□□□□ -0.73
SMARCA4-213ENST00000587988 VCLP18206 1134 aa10.49□□□□□ -0.73
SMARCA4-213ENST00000587988 IDSP22304 550 aa10.49□□□□□ -0.73
SMARCA4-213ENST00000587988 FDXRP22570 491 aa10.49□□□□□ -0.73
SMARCA4-213ENST00000587988 GCAP28676 217 aa10.49□□□□□ -0.73
SMARCA4-213ENST00000587988 PLA2G5P39877 138 aa10.49□□□□□ -0.73
SMARCA4-213ENST00000587988 LIMK1P53667 647 aa10.49□□□□□ -0.73
SMARCA4-213ENST00000587988 HSPA14Q0VDF9 509 aa10.49□□□□□ -0.73
SMARCA4-213ENST00000587988 NAB1Q13506 487 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms