RNA–Protein interactions for RNA: ENST00000586813.5

TRAF4-216, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-216ENST00000586813 ITGA9Q13797 1035 aa18.93■□□□□ 0.62
TRAF4-216ENST00000586813 TMEM220Q6QAJ8 160 aa18.93■□□□□ 0.62
TRAF4-216ENST00000586813 ZC3H18Q86VM9 953 aaKnown RBP18.93■□□□□ 0.62
TRAF4-216ENST00000586813 P3H4Q92791 437 aa18.93■□□□□ 0.62
TRAF4-216ENST00000586813 FCRL4Q96PJ5 515 aa18.93■□□□□ 0.62
TRAF4-216ENST00000586813 CD180Q99467 661 aa18.93■□□□□ 0.62
TRAF4-216ENST00000586813 VAT1Q99536 393 aa18.93■□□□□ 0.62
TRAF4-216ENST00000586813 MAP3K3Q99759 626 aa18.93■□□□□ 0.62
TRAF4-216ENST00000586813 ACTL8Q9H568 366 aa18.93■□□□□ 0.62
TRAF4-216ENST00000586813 IMP3Q9NV31 184 aaKnown RBP18.93■□□□□ 0.62
TRAF4-216ENST00000586813 INTUQ9ULD6 942 aa18.93■□□□□ 0.62
TRAF4-216ENST00000586813 MAN2B2Q9Y2E5 1009 aa18.93■□□□□ 0.62
TRAF4-216ENST00000586813 DNMT3AQ9Y6K1 912 aaPredicted RBP18.93■□□□□ 0.62
TRAF4-216ENST00000586813 PIPSLA2A3N6 862 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 OR5K3A6NET4 321 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 TLCD2A6NGC4 264 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 EBLN1P0CF75 366 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 AKT1P31749 480 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 ACY1Q03154 408 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 MPP3Q13368 585 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 XRCC4Q13426 336 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 TFDP3Q5H9I0 405 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 DNTTIP2Q5QJE6 756 aaKnown RBP18.92■□□□□ 0.62
TRAF4-216ENST00000586813 FNBP1LQ5T0N5 605 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 METRNLQ641Q3 311 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 ASB18Q6ZVZ8 466 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 PID1Q7Z2X4 250 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 KMT5CQ86Y97 462 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 VSTM4Q8IW00 320 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 TEX19Q8NA77 164 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 MIB2Q96AX9 1013 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 HAUS1Q96CS2 278 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 ZNF514Q96K75 400 aaPredicted RBP18.92■□□□□ 0.62
TRAF4-216ENST00000586813 QKIQ96PU8 341 aaKnown RBP eCLIP18.92■□□□□ 0.62
TRAF4-216ENST00000586813 FSD1LQ9BXM9 530 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 FGF21Q9NSA1 209 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 TLK1Q9UKI8 766 aa18.92■□□□□ 0.62
TRAF4-216ENST00000586813 CFAP20Q9Y6A4 193 aaKnown RBP18.92■□□□□ 0.62
TRAF4-216ENST00000586813 PRAMEF1O95521 474 aa18.91■□□□□ 0.62
TRAF4-216ENST00000586813 ARL4DP49703 201 aa18.91■□□□□ 0.62
TRAF4-216ENST00000586813 LONRF2Q1L5Z9 754 aa18.91■□□□□ 0.62
TRAF4-216ENST00000586813 DUS1LQ6P1R4 473 aaKnown RBP18.91■□□□□ 0.62
TRAF4-216ENST00000586813 CERS6Q6ZMG9 384 aa18.91■□□□□ 0.62
TRAF4-216ENST00000586813 BPHLQ86WA6 291 aaPredicted RBP18.91■□□□□ 0.62
TRAF4-216ENST00000586813 APLFQ8IW19 511 aaPredicted RBP18.91■□□□□ 0.62
TRAF4-216ENST00000586813 BEND7Q8N7W2 519 aaPredicted RBP18.91■□□□□ 0.62
TRAF4-216ENST00000586813 RUFY1Q96T51 708 aa18.91■□□□□ 0.62
TRAF4-216ENST00000586813 WWP1Q9H0M0 922 aa18.91■□□□□ 0.62
TRAF4-216ENST00000586813 GOLPH3Q9H4A6 298 aa18.91■□□□□ 0.62
TRAF4-216ENST00000586813 RSPH14Q9UHP6 348 aa18.91■□□□□ 0.62
TRAF4-216ENST00000586813 hCG_1818297A0A087WSY0 165 aa18.9■□□□□ 0.62
TRAF4-216ENST00000586813 NTRK1P04629 796 aa18.9■□□□□ 0.62
TRAF4-216ENST00000586813 MSH3P20585 1137 aa18.9■□□□□ 0.62
TRAF4-216ENST00000586813 CD97P48960 835 aa18.9■□□□□ 0.62
TRAF4-216ENST00000586813 HSD11B2P80365 405 aa18.9■□□□□ 0.62
TRAF4-216ENST00000586813 SEMA5AQ13591 1074 aa18.9■□□□□ 0.62
TRAF4-216ENST00000586813 PTPRCAPQ14761 206 aa18.9■□□□□ 0.62
TRAF4-216ENST00000586813 DET1Q7L5Y6 550 aa18.9■□□□□ 0.62
TRAF4-216ENST00000586813 OOSP2Q86WS3 158 aa18.9■□□□□ 0.62
TRAF4-216ENST00000586813 D2HGDHQ8N465 521 aa18.9■□□□□ 0.62
TRAF4-216ENST00000586813 SEC14L1Q92503 715 aa18.9■□□□□ 0.62
TRAF4-216ENST00000586813 C12orf66Q96MD2 445 aa18.9■□□□□ 0.62
TRAF4-216ENST00000586813 GPR87Q9BY21 358 aa18.9■□□□□ 0.62
TRAF4-216ENST00000586813 AKIRIN1Q9H9L7 192 aaPredicted RBP18.9■□□□□ 0.62
TRAF4-216ENST00000586813 HRASLS2Q9NWW9 162 aa18.9■□□□□ 0.62
TRAF4-216ENST00000586813 TRHDEQ9UKU6 1024 aa18.9■□□□□ 0.62
TRAF4-216ENST00000586813 ALG6Q9Y672 507 aa18.9■□□□□ 0.62
TRAF4-216ENST00000586813 UBA6A0AVT1 1052 aaPredicted RBP18.89■□□□□ 0.61
TRAF4-216ENST00000586813 MGAT4DA6NG13 374 aa18.89■□□□□ 0.61
TRAF4-216ENST00000586813 HACD1B0YJ81 288 aa18.89■□□□□ 0.61
TRAF4-216ENST00000586813 STX7O15400 261 aaKnown RBP18.89■□□□□ 0.61
TRAF4-216ENST00000586813 CPNE3O75131 537 aaKnown RBP18.89■□□□□ 0.61
TRAF4-216ENST00000586813 DNAJB5O75953 348 aa18.89■□□□□ 0.61
TRAF4-216ENST00000586813 PDGFAP04085 211 aa18.89■□□□□ 0.61
TRAF4-216ENST00000586813 PTPN4P29074 926 aa18.89■□□□□ 0.61
TRAF4-216ENST00000586813 HADHBP55084 474 aaKnown RBP18.89■□□□□ 0.61
TRAF4-216ENST00000586813 MLLT10P55197 1068 aa18.89■□□□□ 0.61
TRAF4-216ENST00000586813 RPS18P62269 152 aaKnown RBP18.89■□□□□ 0.61
TRAF4-216ENST00000586813 TUBB4BP68371 445 aa18.89■□□□□ 0.61
TRAF4-216ENST00000586813 TUBB2AQ13885 445 aa18.89■□□□□ 0.61
TRAF4-216ENST00000586813 UGT8Q16880 541 aa18.89■□□□□ 0.61
TRAF4-216ENST00000586813 FAM199XQ6PEV8 388 aaPredicted RBP18.89■□□□□ 0.61
TRAF4-216ENST00000586813 CCDC50Q8IVM0 306 aa18.89■□□□□ 0.61
TRAF4-216ENST00000586813 KATNAL2Q8IYT4 538 aa18.89■□□□□ 0.61
TRAF4-216ENST00000586813 FAM26EQ8N5C1 309 aa18.89■□□□□ 0.61
TRAF4-216ENST00000586813 ZNF398Q8TD17 642 aa18.89■□□□□ 0.61
TRAF4-216ENST00000586813 INSM2Q96T92 566 aaPredicted RBP18.89■□□□□ 0.61
TRAF4-216ENST00000586813 TUBB2BQ9BVA1 445 aa18.89■□□□□ 0.61
TRAF4-216ENST00000586813 TRIM55Q9BYV6 548 aa18.89■□□□□ 0.61
TRAF4-216ENST00000586813 SLC24A2Q9UI40 661 aa18.89■□□□□ 0.61
TRAF4-216ENST00000586813 ARL5AQ9Y689 179 aa18.89■□□□□ 0.61
TRAF4-216ENST00000586813 KLHL33A6NCF5 533 aa18.88■□□□□ 0.61
TRAF4-216ENST00000586813 ZRANB2O95218 330 aaKnown RBP eCLIP18.88■□□□□ 0.61
TRAF4-216ENST00000586813 ZBTB11O95625 1053 aaPredicted RBP18.88■□□□□ 0.61
TRAF4-216ENST00000586813 SLC35G4P0C7Q5 338 aa18.88■□□□□ 0.61
TRAF4-216ENST00000586813 MARCKSL1P49006 195 aa18.88■□□□□ 0.61
TRAF4-216ENST00000586813 LAMB3Q13751 1172 aa18.88■□□□□ 0.61
TRAF4-216ENST00000586813 GPR19Q15760 415 aa18.88■□□□□ 0.61
TRAF4-216ENST00000586813 SYVN1Q86TM6 617 aa18.88■□□□□ 0.61
TRAF4-216ENST00000586813 ATCAYQ86WG3 371 aa18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms