RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 CACNB4O00305 520 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 GPR39O43194 453 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 OR1I1O60431 355 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 DNAJC6O75061 913 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 DKK1O94907 266 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CDK14O94921 469 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 FUCA1P04066 466 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 WNT1P04628 370 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 PCCBP05166 539 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 IVLP07476 585 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 PKMP14618 531 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 ITPKBP27987 946 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 SKIV2L2P42285 1042 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CD151P48509 253 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CLDN2P57739 230 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 TIAL1Q01085 375 aaKnown RBP eCLIP10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 POU4F1Q01851 419 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 LYSMD4Q5XG99 296 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CNSTQ6PJW8 725 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 Q6ZSR6 202 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 MICALCLQ6ZW33 695 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 RABEPKQ7Z6M1 372 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 C11orf96Q7Z7L8 435 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 LDB1Q86U70 411 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CTAGE3PQ8IX95 158 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 RASGEF1AQ8N9B8 481 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 MZB1Q8WU39 189 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 KCNJ9Q92806 393 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 MTBPQ96DY7 904 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 KLHDC7BQ96G42 594 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 ZIM3Q96PE6 472 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 PAFAH2Q99487 392 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 AARSD1Q9BTE6 412 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 BOCQ9BWV1 1114 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 ERVMER34-1Q9H9K5 563 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 POPDC3Q9HBV1 291 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 FZD3Q9NPG1 666 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 TMEM74BQ9NUR3 256 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 DNAAF2Q9NVR5 837 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 ATXN10Q9UBB4 475 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 SUSD2Q9UGT4 822 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 PLAAQ9Y263 795 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 FNDC3AQ9Y2H6 1198 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 MED16Q9Y2X0 877 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 VWA7Q9Y334 891 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 OR1A2Q9Y585 309 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 OAS3Q9Y6K5 1087 aaKnown RBP10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 COL5A1P20908 1838 aaPredicted RBP10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 NOTCH2Q04721 2471 aa10.97□□□□□ -0.65
CDK5RAP3-204ENST00000577664 GON4LQ3T8J9 2241 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 A0A1B0GTW7 788 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 TMEM202A6NGA9 273 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 GOLGA8CPA6NN73 597 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 MEI4A8MW99 385 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 H0Y8X5 98 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 AGPSO00116 658 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 TLR4O00206 839 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 RASGRF2O14827 1237 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 BCAT2O15382 392 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 PIAS1O75925 651 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 WISP3O95389 354 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 INHBAP08476 426 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 ITGA2BP08514 1039 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 MSH3P20585 1137 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 HTR1BP28222 390 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 SLC26A3P40879 764 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 MAGEA12P43365 314 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 DHPSP49366 369 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 PRLHRP49683 370 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CLCNKAP51800 687 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 AFF3P51826 1226 aaKnown RBP10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 MPP1Q00013 466 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 ZNF844Q08AG5 666 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 EFTUD2Q15029 972 aaKnown RBP eCLIP10.96□□□□□ -0.657e-16■□□□□ 10
CDK5RAP3-204ENST00000577664 ZKSCAN8Q15776 578 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 PYCR3Q53H96 274 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 COLEC12Q5KU26 742 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CTSL3PQ5NE16 218 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 FAM45BPQ6NSW5 357 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 SH2D5Q6ZV89 423 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 GPR155Q7Z3F1 870 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CCDC91Q7Z6B0 441 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 SLCO6A1Q86UG4 719 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 ZNF547Q8IVP9 402 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 SLC22A18ASQ8N1D0 253 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 OR13H1Q8NG92 308 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 OR56A4Q8NGH8 313 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CEP76Q8TAP6 659 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 FAM45AQ8TCE6 357 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 SKA1Q96BD8 255 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 PGM2Q96G03 612 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 DCUN1D1Q96GG9 259 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 VPS39Q96JC1 886 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 SLC6A18Q96N87 628 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CLPBQ9H078 707 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 CAPN10Q9HC96 672 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 FBXO6Q9NRD1 293 aaPredicted RBP10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 ZNF446Q9NWS9 450 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 TXNDC16Q9P2K2 825 aa10.96□□□□□ -0.65
CDK5RAP3-204ENST00000577664 PSMC3IPQ9P2W1 217 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms