RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 GLUD1P00367 558 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 CDH1P12830 882 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 RPS3P23396 243 aaKnown RBP eCLIP8.82□□□□□ -1
NCBP3-204ENST00000574911 VARSP26640 1264 aaKnown RBP8.82□□□□□ -1
NCBP3-204ENST00000574911 PWP1Q13610 501 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 TCTN1Q2MV58 587 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 INO80DQ53TQ3 878 aaPredicted RBP8.82□□□□□ -1
NCBP3-204ENST00000574911 ABRAXAS1Q6UWZ7 409 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 FRA10AC1Q70Z53 315 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 GPR141Q7Z602 305 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 PATL1Q86TB9 770 aaKnown RBP8.82□□□□□ -1
NCBP3-204ENST00000574911 ADAMTSL2Q86TH1 951 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 NPAS4Q8IUM7 802 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 CHCHD4Q8N4Q1 142 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 DHRSXQ8N5I4 330 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 PDPRQ8NCN5 879 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 GAB3Q8WWW8 586 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 NSMCE2Q96MF7 247 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 NPLQ9BXD5 320 aaPredicted RBP8.82□□□□□ -1
NCBP3-204ENST00000574911 MAGEE1Q9HCI5 957 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 STOML2Q9UJZ1 356 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 LRFN2Q9ULH4 789 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 PKP3Q9Y446 797 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 CCL27Q9Y4X3 112 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 NEUROG3Q9Y4Z2 214 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 SLC30A1Q9Y6M5 507 aa8.82□□□□□ -1
NCBP3-204ENST00000574911 ZNF701M0R085 212 aaPredicted RBP8.81□□□□□ -1
NCBP3-204ENST00000574911 TAPBPO15533 448 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 FFAR2O15552 330 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 RSL1D1O76021 490 aaKnown RBP8.81□□□□□ -1
NCBP3-204ENST00000574911 SEC24AO95486 1093 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 IRF1P10914 325 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 JAK1P23458 1154 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 MZF1P28698 734 aaPredicted RBP8.81□□□□□ -1
NCBP3-204ENST00000574911 CA5AP35218 305 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 SOX11P35716 441 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 HMGCLP35914 325 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 TRAF3Q13114 568 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 ABRAXAS2Q15018 415 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 CRY1Q16526 586 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 PYCR3Q53H96 274 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 TBPL2Q6SJ96 375 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 CERS6Q6ZMG9 384 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 LYSMD3Q7Z3D4 306 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 RALGPS2Q86X27 583 aaPredicted RBP8.81□□□□□ -1
NCBP3-204ENST00000574911 EZH1Q92800 747 aaPredicted RBP8.81□□□□□ -1
NCBP3-204ENST00000574911 CCDC97Q96F63 343 aaPredicted RBP8.81□□□□□ -1
NCBP3-204ENST00000574911 CGREF1Q99674 301 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 YTHDF1Q9BYJ9 559 aaKnown RBP8.81□□□□□ -1
NCBP3-204ENST00000574911 PIF1Q9H611 641 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 LIN28AQ9H9Z2 209 aaKnown RBP8.81□□□□□ -1
NCBP3-204ENST00000574911 ELOVL2Q9NXB9 296 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 TRPM5Q9NZQ8 1165 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 PCDHB9Q9Y5E1 797 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 OR51B4Q9Y5P0 310 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 BACE2Q9Y5Z0 518 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 GOLGA8CPA6NN73 597 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 H0Y858 1186 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 GAPDHSO14556 408 aaPredicted RBP8.81□□□□□ -1
NCBP3-204ENST00000574911 RAD51BO15315 384 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 SEC24DO94855 1032 aaPredicted RBP8.81□□□□□ -1
NCBP3-204ENST00000574911 PRSS23O95084 383 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 CLIC3O95833 236 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 OTCP00480 354 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 S100BP04271 92 aaPredicted RBP8.81□□□□□ -1
NCBP3-204ENST00000574911 CNPP09543 421 aaKnown RBP8.81□□□□□ -1
NCBP3-204ENST00000574911 CTPS1P17812 591 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 RPL17P18621 184 aaKnown RBP8.81□□□□□ -1
NCBP3-204ENST00000574911 MSH3P20585 1137 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 OR1D2P34982 312 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 EMP3P54852 163 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 ESRRGP62508 458 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 NR6A1Q15406 480 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 AAK1Q2M2I8 961 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 AP5B1Q2VPB7 878 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 LRRC23Q53EV4 343 aaPredicted RBP8.81□□□□□ -1
NCBP3-204ENST00000574911 DHRS4L2Q6PKH6 230 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 RNF165Q6ZSG1 346 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 SERPINA9Q86WD7 417 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 GALNT13Q8IUC8 556 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 LRRC43Q8N309 656 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 CARNMT1Q8N4J0 409 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 DTWD1Q8N5C7 304 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 B4GALNT2Q8NHY0 566 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 MAGEE2Q8TD90 523 aaPredicted RBP8.81□□□□□ -1
NCBP3-204ENST00000574911 NUDT8Q8WV74 236 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 PIH1D2Q8WWB5 315 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 PPM1MQ96MI6 270 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 SEPHS2Q99611 448 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 BDH2Q9BUT1 245 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 MRPL9Q9BYD2 267 aaKnown RBP8.81□□□□□ -1
NCBP3-204ENST00000574911 GPR63Q9BZJ6 419 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 NTN4Q9HB63 628 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 STARD7Q9NQZ5 370 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 TLR9Q9NR96 1032 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 DNMT3BQ9UBC3 853 aaKnown RBP8.81□□□□□ -1
NCBP3-204ENST00000574911 OARD1Q9Y530 152 aa8.81□□□□□ -1
NCBP3-204ENST00000574911 POLR3HQ9Y535 204 aaPredicted RBP8.81□□□□□ -1
NCBP3-204ENST00000574911 C2orf78A6NCI8 922 aa8.8□□□□□ -1
NCBP3-204ENST00000574911 TBKBP1A7MCY6 615 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms