RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 TSPAN12O95859 305 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 CNPP09543 421 aaKnown RBP17.23■□□□□ 0.35
SCARF1-205ENST00000571272 FUT4P22083 530 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 TUSC3Q13454 348 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 AQP6Q13520 282 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 FAM110CQ1W6H9 321 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 GDF6Q6KF10 455 aaPredicted RBP17.23■□□□□ 0.35
SCARF1-205ENST00000571272 CYP20A1Q6UW02 462 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 DNAJC14Q6Y2X3 702 aaPredicted RBP17.23■□□□□ 0.35
SCARF1-205ENST00000571272 TTC9BQ8N6N2 239 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 MDGA1Q8NFP4 955 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 SDCCAG3Q96C92 435 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 BTN2A3PQ96KV6 586 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 TBCDQ9BTW9 1192 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 FUNDC2Q9BWH2 189 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 AMBRA1Q9C0C7 1298 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 COMMD8Q9NX08 183 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 VAPAQ9P0L0 249 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 LIMD1Q9UGP4 676 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 TRMT6Q9UJA5 497 aaKnown RBP17.23■□□□□ 0.35
SCARF1-205ENST00000571272 SCML2Q9UQR0 700 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 ERGIC3Q9Y282 383 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 IGLV3-10A0A075B6K4 115 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 GNGT2O14610 69 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 MAN1A2O60476 641 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 CST1P01037 141 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 HTR1AP08908 422 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 PRKACGP22612 351 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 HOXC8P31273 242 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 RGRP47804 291 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 ZNF140P52738 457 aaPredicted RBP17.23■□□□□ 0.35
SCARF1-205ENST00000571272 CTU2Q2VPK5 515 aaKnown RBP17.23■□□□□ 0.35
SCARF1-205ENST00000571272 CRTC3Q6UUV7 619 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 CXCL17Q6UXB2 119 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 NKAPQ8N5F7 415 aaKnown RBP17.23■□□□□ 0.35
SCARF1-205ENST00000571272 DPP10Q8N608 796 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 TMCO5AQ8N6Q1 288 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 OR10A6Q8NH74 314 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 SUSD3Q96L08 255 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 ZNF583Q96ND8 569 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 THUMPD3Q9BV44 507 aaKnown RBP17.23■□□□□ 0.35
SCARF1-205ENST00000571272 CCDC90BQ9GZT6 254 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 NLE1Q9NVX2 485 aaPredicted RBP17.23■□□□□ 0.35
SCARF1-205ENST00000571272 SLC27A5Q9Y2P5 690 aa17.23■□□□□ 0.35
SCARF1-205ENST00000571272 SLC12A8A0AV02 714 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 GSTA4O15217 222 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 GPR39O43194 453 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 PRAMEF11O60813 436 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 PRSS23O95084 383 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 EPOP01588 193 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 GGT1P19440 569 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 OPRL1P41146 370 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 MRPL19P49406 292 aaKnown RBP17.22■□□□□ 0.35
SCARF1-205ENST00000571272 CBX2Q14781 532 aaPredicted RBP17.22■□□□□ 0.35
SCARF1-205ENST00000571272 RFTN2Q52LD8 501 aaPredicted RBP17.22■□□□□ 0.35
SCARF1-205ENST00000571272 C10orf120Q5SQS8 335 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 C6orf141Q5SZD1 244 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 TXNDC11Q6PKC3 985 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 SPESP1Q6UW49 350 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 RBM23Q86U06 439 aaKnown RBP17.22■□□□□ 0.35
SCARF1-205ENST00000571272 CHDHQ8NE62 594 aaPredicted RBP17.22■□□□□ 0.35
SCARF1-205ENST00000571272 ABHD11Q8NFV4 315 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 NEURL2Q9BR09 285 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 GPN2Q9H9Y4 310 aaPredicted RBP17.22■□□□□ 0.35
SCARF1-205ENST00000571272 PDE10AQ9Y233 779 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 DYTNA2CJ06 578 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 VPS26AO75436 327 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 CDH3P22223 829 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 GSTM2P28161 218 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 GGT5P36269 586 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 RXRGP48443 463 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 RAB15P59190 212 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 TUBA3CQ13748 450 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 SKIV2LQ15477 1246 aaKnown RBP17.22■□□□□ 0.35
SCARF1-205ENST00000571272 AP5B1Q2VPB7 878 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 PARP15Q460N3 678 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 MRPL10Q7Z7H8 261 aaKnown RBP17.22■□□□□ 0.35
SCARF1-205ENST00000571272 ABI1Q8IZP0 508 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 OR7D4Q8NG98 312 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 PTPN18Q99952 460 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 SPON2Q9BUD6 331 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 C1QTNF3Q9BXJ4 246 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 ADGRE2Q9UHX3 823 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 ZMYM5Q9UJ78 669 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 SOBPA7XYQ1 873 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 TOR1BO14657 336 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 KLK8O60259 260 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 TBC1D4O60343 1298 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 ADAM23O75077 832 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 BCAS1O75363 584 aaPredicted RBP17.22■□□□□ 0.35
SCARF1-205ENST00000571272 PKMP14618 531 aaKnown RBP17.22■□□□□ 0.35
SCARF1-205ENST00000571272 IDUAP35475 653 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 IL2P60568 153 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 CD300CQ08708 224 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 CD47Q08722 323 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 KCNAB2Q13303 367 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 RBM48Q5RL73 367 aaKnown RBP17.22■□□□□ 0.35
SCARF1-205ENST00000571272 TTC23Q5W5X9 447 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 AFTPHQ6ULP2 937 aa17.22■□□□□ 0.35
SCARF1-205ENST00000571272 OR2T12Q8NG77 320 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms