RNA–Protein interactions for RNA: ENST00000560314.1

LINC02253-202, Transcript of long intergenic non-protein coding RNA 2253, humanhuman

TSL 5 BASIC

Gene LINC02253, Length 565 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02253-202ENST00000560314 HLA-DPA1P20036 260 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 PTPN3P26045 913 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 UQCRFS1P47985 274 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 NR2C2P49116 596 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 GSDMDP57764 484 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 PRKD1Q15139 912 aaPredicted RBP10.9□□□□□ -0.66
LINC02253-202ENST00000560314 CHRNA6Q15825 494 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 PPP2R5EQ16537 467 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 LONRF2Q1L5Z9 754 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 ODF2Q5BJF6 829 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 TMTC4Q5T4D3 741 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 GLT6D1Q7Z4J2 308 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 TMEM126BQ8IUX1 230 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 SPATA22Q8NHS9 363 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 SSC4DQ8WTU2 575 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 CPLX3Q8WVH0 158 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 RNF31Q96EP0 1072 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 VAT1Q99536 393 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 ING2Q9H160 280 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 KIR3DX1Q9H7L2 352 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 FANCEQ9HB96 536 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 SYTL2Q9HCH5 934 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 BPIFA1Q9NP55 256 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 IL17CQ9P0M4 197 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 TRIM10Q9UDY6 481 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 BTRCQ9Y297 605 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 PKP3Q9Y446 797 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 ZNF451Q9Y4E5 1061 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 SPO11Q9Y5K1 396 aa10.9□□□□□ -0.66
LINC02253-202ENST00000560314 GLYATL1P3A0A0U1RQE8 302 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 LOC285095A0A1B0GVY8 99 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 SSU72P8A0A1W2PR75 194 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 DPM1O60762 260 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 POP7O75817 140 aaKnown RBP10.89□□□□□ -0.67
LINC02253-202ENST00000560314 CEACAM4O75871 244 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 TPM3P06753 285 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 KLK3P07288 261 aaPredicted RBP10.89□□□□□ -0.67
LINC02253-202ENST00000560314 RAB40ALP0C0E4 278 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 GNLYP22749 145 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 NDUFS1P28331 727 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 SLC1A1P43005 524 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 CTSCP53634 463 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 WNT3AP56704 352 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 XRCC4Q13426 336 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 IL10RAQ13651 578 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 TFDP2Q14188 446 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 NFE2L1Q14494 772 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 MESDQ14696 234 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 KCNAB1Q14722 419 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 METRNLQ641Q3 311 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 CPZQ66K79 652 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 ARMC6Q6NXE6 501 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 FAM151BQ6UXP7 276 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 RFX6Q8HWS3 928 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 RHOT2Q8IXI1 618 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 TTC30BQ8N4P2 665 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 RASGEF1AQ8N9B8 481 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 ADAMTS17Q8TE56 1095 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 TFB1MQ8WVM0 346 aaKnown RBP10.89□□□□□ -0.67
LINC02253-202ENST00000560314 CPT1BQ92523 772 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 ZNF501Q96CX3 271 aaPredicted RBP10.89□□□□□ -0.67
LINC02253-202ENST00000560314 PACSIN1Q9BY11 444 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 SLC29A3Q9BZD2 475 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 DEF6Q9H4E7 631 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 KCND1Q9NSA2 647 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 IMP3Q9NV31 184 aaKnown RBP10.89□□□□□ -0.67
LINC02253-202ENST00000560314 HRASLS2Q9NWW9 162 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 DDX56Q9NY93 547 aaKnown RBP10.89□□□□□ -0.67
LINC02253-202ENST00000560314 PLEKHB1Q9UF11 243 aaPredicted RBP10.89□□□□□ -0.67
LINC02253-202ENST00000560314 ACSL5Q9ULC5 683 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 FARSAQ9Y285 508 aaKnown RBP10.89□□□□□ -0.67
LINC02253-202ENST00000560314 MAP4K5Q9Y4K4 846 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.89□□□□□ -0.67
LINC02253-202ENST00000560314 CACNA1DQ01668 2161 aa10.89□□□□□ -0.67
LINC02253-202ENST00000560314 PIKFYVEQ9Y2I7 2098 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 OR2AG2A6NM03 316 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 DDAH2O95865 285 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 SLC35G4P0C7Q5 338 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 MSL3P1P0C860 447 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 MSH3P20585 1137 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 RRADP55042 308 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 RPS18P62269 152 aaKnown RBP10.88□□□□□ -0.67
LINC02253-202ENST00000560314 PRKAA1Q13131 559 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 GPS2Q13227 327 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 MPP3Q13368 585 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 TRIM14Q14142 442 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 SLC1A5Q15758 541 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 NADK2Q4G0N4 442 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 SIRPB2Q5JXA9 342 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 GPRC6AQ5T6X5 926 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 CAVIN1Q6NZI2 390 aaKnown RBP10.88□□□□□ -0.67
LINC02253-202ENST00000560314 FAM199XQ6PEV8 388 aaPredicted RBP10.88□□□□□ -0.67
LINC02253-202ENST00000560314 TMEM220Q6QAJ8 160 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 KDELC1Q6UW63 502 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 NPNTQ6UXI9 565 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 FAM83HQ6ZRV2 1179 aaPredicted RBP10.88□□□□□ -0.67
LINC02253-202ENST00000560314 LUZP1Q86V48 1076 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 RHOT1Q8IXI2 618 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 DSELQ8IZU8 1212 aa10.88□□□□□ -0.67
LINC02253-202ENST00000560314 TMEM102Q8N9M5 508 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms