RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 TXNDC11Q6PKC3 985 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 PRSS55Q6UWB4 352 aaPredicted RBP13.82□□□□□ -0.2
SPG11-210ENST00000558319 ASB7Q9H672 318 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 UGT1A7Q9HAW7 530 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 UGT1A10Q9HAW8 530 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 UGT1A8Q9HAW9 530 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 PTTG2Q9NZH5 202 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 MFHAS1Q9Y4C4 1052 aa13.82□□□□□ -0.2
SPG11-210ENST00000558319 TREHO43280 583 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 PAEPP09466 180 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 AHCYP23526 432 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 UAP1L1Q3KQV9 507 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 CCDC120Q96HB5 630 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 MED11Q9P086 117 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 SEC14L3Q9UDX4 400 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 FAM86C2PA6NEL3 165 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 CXCL11O14625 94 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 ECHS1P30084 290 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 AXLP30530 894 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 SP140Q13342 867 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 KLF1Q13351 362 aaPredicted RBP13.81□□□□□ -0.2
SPG11-210ENST00000558319 FOXRED2Q8IWF2 684 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 ZNF567Q8N184 647 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 PYROXD2Q8N2H3 581 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 AZIN2Q96A70 460 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 MYO19Q96H55 970 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 RPL26L1Q9UNX3 145 aaKnown RBP13.81□□□□□ -0.2
SPG11-210ENST00000558319 PEX16Q9Y5Y5 336 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 GNALP38405 381 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 ZNF135P52742 658 aaPredicted RBP13.81□□□□□ -0.2
SPG11-210ENST00000558319 TSPAN5P62079 268 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 FASTKD3Q14CZ7 662 aaKnown RBP13.81□□□□□ -0.2
SPG11-210ENST00000558319 PHYKPLQ8IUZ5 450 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 ZNF214Q9UL59 606 aaPredicted RBP13.81□□□□□ -0.2
SPG11-210ENST00000558319 FKBP7Q9Y680 259 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 CFAP20Q9Y6A4 193 aaKnown RBP13.81□□□□□ -0.2
SPG11-210ENST00000558319 LOC100509620A0A075B734 347 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 CCR10P46092 362 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 DNASE1L1P49184 302 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 ELP6Q0PNE2 266 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 CPTPQ5TA50 214 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 MAP4K3Q8IVH8 894 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 IRGMA1A4Y4 181 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 SMCO3A2RU48 225 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 RPLP0P05388 317 aaKnown RBP13.81□□□□□ -0.2
SPG11-210ENST00000558319 TWIST2Q8WVJ9 160 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 DNAJA4Q8WW22 397 aaPredicted RBP13.81□□□□□ -0.2
SPG11-210ENST00000558319 APOLD1Q96LR9 279 aa13.81□□□□□ -0.2
SPG11-210ENST00000558319 STOX2Q9P2F5 926 aaPredicted RBP13.81□□□□□ -0.2
SPG11-210ENST00000558319 ASTN1O14525 1302 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 BBIP1A8MTZ0 92 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 TULP2O00295 520 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 AURKAO14965 403 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 CLCNKBP51801 687 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 PAOXQ6QHF9 649 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 SLC22A16Q86VW1 577 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 TMEM86AQ8N2M4 240 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 OR4K2Q8NGD2 314 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 RFT1Q96AA3 541 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 CADM1Q9BY67 442 aaKnown RBP13.8□□□□□ -0.2
SPG11-210ENST00000558319 NCANO14594 1321 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 ELOVL7A1L3X0 281 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 J3QRK9 145 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 ZNF143P52747 638 aaPredicted RBP13.8□□□□□ -0.2
SPG11-210ENST00000558319 AP3S2P59780 193 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 MCCD1P59942 119 aaPredicted RBP13.8□□□□□ -0.2
SPG11-210ENST00000558319 ZNF267Q14586 743 aaPredicted RBP13.8□□□□□ -0.2
SPG11-210ENST00000558319 WSCD2Q2TBF2 565 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 ATXN7L2Q5T6C5 722 aaPredicted RBP13.8□□□□□ -0.2
SPG11-210ENST00000558319 GDF6Q6KF10 455 aaPredicted RBP13.8□□□□□ -0.2
SPG11-210ENST00000558319 HID1Q8IV36 788 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 ZBTB8BQ8NAP8 495 aaPredicted RBP13.8□□□□□ -0.2
SPG11-210ENST00000558319 HJURPQ8NCD3 748 aaPredicted RBP13.8□□□□□ -0.2
SPG11-210ENST00000558319 FBXL8Q96CD0 374 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 BRD7Q9NPI1 651 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 RNF17Q9BXT8 1623 aaKnown RBP13.8□□□□□ -0.2
SPG11-210ENST00000558319 LRRC72A6NJI9 287 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 NOL4O94818 638 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 MAPTP10636 758 aaKnown RBP13.8□□□□□ -0.2
SPG11-210ENST00000558319 CDH4P55283 916 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 BNIP3Q12983 259 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 UBAP2Q5T6F2 1119 aaKnown RBP13.8□□□□□ -0.2
SPG11-210ENST00000558319 PRAMEF17Q5VTA0 474 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 USP43Q70EL4 1123 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 FAM83AQ86UY5 434 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 LAPTM4BQ86VI4 370 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 SLC27A6Q9Y2P4 619 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 FRMPD4Q14CM0 1322 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 ZNF99A8MXY4 864 aaPredicted RBP13.8□□□□□ -0.2
SPG11-210ENST00000558319 C1RP00736 705 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 CFIP05156 583 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 CRHR1P34998 444 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 MAPK12P53778 367 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 ATXN1P54253 815 aaKnown RBP13.8□□□□□ -0.2
SPG11-210ENST00000558319 CDH12P55289 794 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 MPP1Q00013 466 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 DIP2AQ14689 1571 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 SLC8B1Q6J4K2 584 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 SPATA19Q7Z5L4 167 aa13.8□□□□□ -0.2
SPG11-210ENST00000558319 FAM35AQ86V20 835 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms